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Report for CCDS48371.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48371.1 Public Mus musculus 1 Gpr37l1 23 108 98 CCDS HistoryNCBI Gene:171469Re-query CCDS DB by CCDS ID:48371.1Re-query CCDS DB by GeneID:171469See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48371.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027682.8 ENSMUSP00000027682.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027682.8Link to Ensembl Protein Viewer:ENSMUSP00000027682.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000027682Re-query CCDS DB by Protein ID:ENSMUSP00000027682
Original member Current member NCBI NM_134438.3 NP_602320.2 Accepted alive Link to Nucleotide Sequence:NM_134438.3Link to Protein Sequence:NP_602320.2Re-query CCDS DB by Nucleotide ID:NM_134438Re-query CCDS DB by Protein ID:NP_602320Link to BLAST:NP_602320.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_602320.2 481 Q99JG2 481 100% 0 0

Chromosomal Locations for CCDS 48371.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 135160880 135161695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 135166875 135167504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1446 nt):
ATGCGGTGGCTGTGGCCCCTGGCTGTGTCTCTTGTTGTAGTGTTGACTGTGGGGCTGAGTGGGGTCTCTG
GGGCTGCCACCTCATCTTTAGGTGGGCATAGAGCCAAGGTCCAGGAGCAGCAGAGTCGACCCCGAAGAGG
CACCAAGGACGAGGGGCCCAAGGAGGTACAGCACTATGTACCCGAGGAGTGGGCTGAATATCCCAAGCCC
ATCCATCCTGCTGGCCTGCAGCCCACCAAGACTTTGGAGGCCACTAGCCCCAACCCAGACAAGGATGGGG
CCACCCCAGGTAATGGACAAGAGCTGAGGGTCAACCTGACCGGGACGCCAAGTCAGAGGCTGCAGATTCA
GAACCCCCTGTATCCGGTGACCGAGAGCTCCTACAGCGCCTACGCCATCATGCTCCTGGCTCTGGTGGTG
TTTGCTGTGGGTATCGTTGGCAATCTGTCTGTCATGTGCATTGTGTGGCACAGCTACTACTTGAAGAGTG
CCTGGAACTCTATCCTTGCCAGCCTGGCTCTCTGGGATTTCCTGGTCCTCTTCTTCTGCCTCCCAATTGT
CATCTTCAATGAGATTACCAAGCAAAGGCTACTCGGGGATGTTTCTTGCCGGGCAGTGCCCTTCATGGAG
GTCTCCTCCCTGGGAGTCACAACCTTCAGTCTCTGTGCCCTGGGCATAGACCGATTCCATGTGGCCACCA
GCACCCTGCCAAAGGTGAGGCCCATTGAGCGATGTCAATCAATTCTGGCTAAACTAGCTGTCATCTGGGT
GGGCTCCATGATGCTGGCCGTGCCCGAACTCCTGCTATGGCAGCTGGCCCAGGAGCCGGCTCCCACCGCA
GGAACTGTGGACTCGTGTATCATGAAACCTTCAGCTGACCTGCCCGAATCTGTCTATTCGCTGGTGATGA
CCTACCAGAATGCCCGCATGTGGTGGTATTTTGGTTGCTACTTCTGTCTGCCCATCCTCTTCACCGTCAC
CTGTCAGCTGGTGACGTGGCGGGTGCGGGGCCCACCAGGCAGGAAGCCTGAGTGTAGAGCGGGCAGGCAT
GAGCAGTGTGAGAGCCAGCTCAACAGCACCGTGGTCGGCCTGACTGTGGTCTATGCCTTCTGTACACTCC
CTGAGAACGTCTGCAATATCGTGGTGGCTTACCTCTCTACCGAGCTCACGCGGCAGACCCTGGACCTCCT
GGGCCTCATCAACCAGTTCTCCACCTTCTTTAAGGGCGCCATCACCCCTGTGCTCCTCCTGTGCATCTGC
AGGCCACTGGGCCAGGCCTTTCTGGATTGCTGCTGCTGCTGCTGCTGCGAGGAGTGCGGCGGGGCCTCAG
ACTCCTCAGCCACAGTCAGCGCGGACAGCAAGCTGAAGGCGGAAGTGTCCTCTTCTATCTACTTCCACAA
GCCCAGGGAGTCGCCCCCACTCCTGCCCCTGGGCACCCCTTGCTGA

Translation (481 aa):
MRWLWPLAVSLVVVLTVGLSGVSGAATSSLGGHRAKVQEQQSRPRRGTKDEGPKEVQHYVPEEWAEYPKP
IHPAGLQPTKTLEATSPNPDKDGATPGNGQELRVNLTGTPSQRLQIQNPLYPVTESSYSAYAIMLLALVV
FAVGIVGNLSVMCIVWHSYYLKSAWNSILASLALWDFLVLFFCLPIVIFNEITKQRLLGDVSCRAVPFME
VSSLGVTTFSLCALGIDRFHVATSTLPKVRPIERCQSILAKLAVIWVGSMMLAVPELLLWQLAQEPAPTA
GTVDSCIMKPSADLPESVYSLVMTYQNARMWWYFGCYFCLPILFTVTCQLVTWRVRGPPGRKPECRAGRH
EQCESQLNSTVVGLTVVYAFCTLPENVCNIVVAYLSTELTRQTLDLLGLINQFSTFFKGAITPVLLLCIC
RPLGQAFLDCCCCCCCEECGGASDSSATVSADSKLKAEVSSSIYFHKPRESPPLLPLGTPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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