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Report for CCDS4860.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4860.1 Public Homo sapiens 6 FRS3 24 110 108 CCDS HistoryNCBI Gene:10817Re-query CCDS DB by CCDS ID:4860.1Re-query CCDS DB by GeneID:10817See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4860.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259748.6 ENSP00000259748.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000259748.6Link to Ensembl Protein Viewer:ENSP00000259748.2Re-query CCDS DB by Nucleotide ID:ENST00000259748Re-query CCDS DB by Protein ID:ENSP00000259748
Original member Current member EBI ENST00000373018.7 ENSP00000362109.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373018.7Link to Ensembl Protein Viewer:ENSP00000362109.3Re-query CCDS DB by Nucleotide ID:ENST00000373018Re-query CCDS DB by Protein ID:ENSP00000362109
Original member Current member NCBI NM_006653.5 NP_006644.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006653.5Link to Protein Sequence:NP_006644.1Re-query CCDS DB by Nucleotide ID:NM_006653Re-query CCDS DB by Protein ID:NP_006644Link to BLAST:NP_006644.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006644.1 492 O43559 492 100% 0 0

Chromosomal Locations for CCDS 4860.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 41770619 41771533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41771816 41771964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41772798 41772959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41775419 41775605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41776922 41776987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGGGGAGCTGCTGCAGCTGCCTGAACAGAGACAGCGTTCCAGACAACCACCCCACCAAGTTCAAGGTGA
CAAATGTGGATGATGAGGGGGTGGAGCTGGGCTCTGGGGTGATGGAGCTGACGCAGAGTGAGCTGGTGCT
GCACCTGCATCGGCGTGAGGCCGTCCGCTGGCCTTATCTCTGCTTGCGGCGCTATGGCTACGACTCCAAC
CTCTTCTCCTTTGAGAGTGGCCGCCGATGTCAGACAGGCCAGGGAATATTTGCATTTAAGTGTTCCCGGG
CTGAGGAAATCTTCAACCTCCTTCAGGATCTGATGCAGTGCAACAGCATCAATGTGATGGAAGAGCCTGT
CATCATCACCCGCAATAGCCACCCCGCTGAGCTTGACCTCCCTCGAGCCCCCCAGCCACCCAATGCTCTA
GGCTACACTGTCTCCAGCTTTTCCAATGGCTGCCCTGGAGAGGGCCCACGATTCTCAGCTCCCCGGCGGC
TCTCGACAAGCAGCCTGCGGCACCCCTCGCTTGGGGAAGAGTCCACCCATGCCCTCATTGCTCCTGATGA
GCAGTCCCACACCTATGTCAACACACCGGCCAGTGAAGATGACCACCGCAGGGGCCGCCACTGCCTGCAG
CCCCTGCCTGAGGGTCAGGCACCCTTCCTCCCGCAGGCCCGGGGACCTGACCAACGGGACCCACAGGTGT
TCTTGCAGCCAGGCCAGGTGAAGTTTGTGTTGGGCCCGACCCCTGCTCGGCGGCACATGGTGAAGTGCCA
GGGCCTCTGTCCCAGCCTGCATGACCCCCCACACCACAATAATAACAATGAGGCCCCTTCTGAGTGTCCA
GCCCAGCCCAAGTGCACCTACGAGAACGTCACCGGGGGGCTGTGGCGAGGGGCTGGCTGGAGACTGAGCC
CAGAGGAGCCGGGCTGGAATGGCCTTGCCCACCGCCGGGCCGCCCTGCTGCACTATGAGAACCTGCCCCC
ACTGCCCCCTGTGTGGGAAAGCCAAGCCCAGCAGCTGGGAGGGGAGGCTGGGGATGATGGGGACTCGAGG
GATGGGCTCACACCCTCTTCCAATGGCTTCCCTGATGGTGAGGAGGACGAGACCCCACTGCAGAAGCCCA
CCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGCGGCTCCCC
AAGGGTCTTCAACTTTGATTTCCGCCGGCCGGGGCCCGAGCCCCCAAGGCAGCTTAACTACATCCAGGTG
GAGCTAAAGGGCTGGGGTGGAGACCGCCCTAAGGGGCCCCAGAACCCCTCGAGCCCCCAAGCCCCCATGC
CCACCACCCACCCTGCCCGAAGCTCAGACTCCTACGCCGTGATTGACCTCAAAAAGACCGTGGCCATGTC
CAACCTGCAGAGAGCTCTGCCCCGAGACGATGGCACCGCCAGGAAAACCCGGCACAACAGCACCGACCTG
CCTCTGTAG

Translation (492 aa):
MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYLCLRRYGYDSN
LFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIITRNSHPAELDLPRAPQPPNAL
GYTVSSFSNGCPGEGPRFSAPRRLSTSSLRHPSLGEESTHALIAPDEQSHTYVNTPASEDDHRRGRHCLQ
PLPEGQAPFLPQARGPDQRDPQVFLQPGQVKFVLGPTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECP
AQPKCTYENVTGGLWRGAGWRLSPEEPGWNGLAHRRAALLHYENLPPLPPVWESQAQQLGGEAGDDGDSR
DGLTPSSNGFPDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRVFNFDFRRPGPEPPRQLNYIQV
ELKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDSYAVIDLKKTVAMSNLQRALPRDDGTARKTRHNSTDL
PL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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