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Report for CCDS48641.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48641.1 Public Mus musculus 10 Tmprss9 23 108 98 CCDS HistoryNCBI Gene:432478Re-query CCDS DB by CCDS ID:48641.1Re-query CCDS DB by GeneID:432478See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48641.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105333.2 ENSMUSP00000100970.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105333.2Link to Ensembl Protein Viewer:ENSMUSP00000100970.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000105333Re-query CCDS DB by Protein ID:ENSMUSP00000100970
Original member Current member EBI ENSMUST00000219817.1 ENSMUSP00000152034.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000219817.1Link to Ensembl Protein Viewer:ENSMUSP00000152034.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000219817Re-query CCDS DB by Protein ID:ENSMUSP00000152034
Original member Current member NCBI NM_001081688.2 NP_001075157.2 Accepted alive Link to Nucleotide Sequence:NM_001081688.2Link to Protein Sequence:NP_001075157.2Re-query CCDS DB by Nucleotide ID:NM_001081688Re-query CCDS DB by Protein ID:NP_001075157Link to BLAST:NP_001075157.2

Chromosomal Locations for CCDS 48641.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80879816 80879963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80882635 80882762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80883719 80883786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80883943 80884118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80885148 80885189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80886066 80886179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80887384 80887555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80888286 80888560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80889330 80889466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80890178 80890496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80892157 80892328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80892986 80893257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80894291 80894427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80894802 80895207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80897198 80897369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80897844 80898106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80898185 80898321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80899179 80899340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3300 nt):
ATGGAGCCCACTGCACCAGACTTACAACTTGTGCCAGAGGTGACAAAGGCTGTCTCTGTATCTGCTCCAG
ACCCTGGCCCTTGTCGAACGGCTGTCATCGCAGTGGTGGGCATCAGCATGGCCATCGTGACCCTGGGAGT
CCTTTCAGCCTTCTTCTCCGCACAGGGCGCCCACGTGGAGCACATAGCAGAGCTACATGGGATCCGTTTC
ACCAGTTCTTTGCAGCAGGAGAACTCTGACTTCTACCGCCTACTCACGCATGCTCTGCAGACACTGTTTG
TGAGTAGTTTCCAGAAAACAGAGTTAGAGTCGAGCTGCGCAGGCTGCACCGTGCTTAGTTACAGGGATGG
CAATTCCACTGTGATTGTACATTTCCGGCTACACTTTCTGCTCCGAGCCCTCCAGCCCCTGAGCCTGAAG
CAGGAAGCAGACATCTTGCAGAAAGGAATCCAGGCAAGGCTGCAGGAACAAGGTCTTTCCCTGGCTGCCT
ATGGCACCATCGTGTCAGTCGAGCTGACAGGAAGGTGTGAAGGTCCGGTGACTGAGAGGGACTTAAAGTC
AGGCCACTGCCCCGGGAATGTCTTCTCCTGTCAGAATGGTCAGTGCGTGAGCAAAGAGAACCCGGAGTGT
GATGACAGAGTGGACTGCTCCGACGAGTCTGATGAGGCTCAGTGCGACTGCGGCTGGCAGCCTGCCTGGA
GGTCAGCTGGCAGGATCGTGGGAGGAGTGGAGGCGGCTCCCGGGGAGTTCCCCTGGCAGGTCAGTCTTCG
AGAGAATCACGAACACTTCTGTGGCGCCACCATCATCGGTGCCAGGTGGCTGGTGTCTGCTGCCCACTGC
TTCAACGAATTCCAGGACCCTGCGCAGTGGGCCGCCCAGGCGGGCAGTGTGCACCTGAGCGGGTCAGAGG
CCAGCGCTGTGCGCACACGCGTGCTCCGCATAGCCAAGCATCCTGCCTATGATGCGGACACAGCGGACTT
CGACGTGGCGGTGCTGGAGCTGGCGCGCCCGCTGCCCTTCGGACGCTATGTGCAGCCTGCCTGCCTCCCC
GCGGCCACGCACGTCTTCCCGCCGGGCAAGAAGTGTCTGATCTCGGGCTGGGGTTACCTGAAAGAGGACT
TCCTGGTGAAGCCAGAGGTCCTTCAGAAAGCCACGGTGGAATTGCTGGACCAGAGCCTGTGTTCCAGCCT
GTACGGCCACTCGCTCACCGACAGGATGGTGTGTGCCGGCTACCTGGACGGGAAGGTAGACTCCTGCCAG
GGGGACTCCGGGGGACCCCTGGTCTGCGAGGAGCCTTCAGGAAGGTTCTTCCTGGCTGGTATCGTGAGCT
GGGGAATCGGCTGCGCAGAAGCGCGGCGCCCAGGGGTCTACACCCGAGTCACCAGGCTGCGGGATTGGAT
CTTGGAGGTGACCAGCGCTGCTGACATGCCTGTGGTCCCCACCGCGACTCCAGCGCCCGCCACCCCCAGC
ACTCCCTGGCCTACCAGCCCTGAGAGCTGGGCGCCCAACACCTTTGCCAAACCCACCGCTGCCCCCAGCC
CTGTGCCACTGCACCCCAGCACTACGGCCAAGCCACAAGAGTGTGGGGCCAGACCCGCCATGGACAAGCC
CACTCGGATTGTGGGCGGGATCAGCGCCGTGTCTGGGGAGGTGCCCTGGCAGGCCAGCCTGAAGGAAGGA
CCCAGACATTTCTGCGGAGCCACCGTGGTGGGTGACCGCTGGCTGCTGTCTGCCGCCCACTGTTTCAACC
ACACCAAAGTGGAGCAGGTGCAGGCGCACCTGGGCACCGTGTCCCTGCTGGGTGTCGGCGGGAGCCCCGT
GAAACTGGGGCTCCGAAGGGTGGCCCTGCATCCCCGCTACAACCCAGGAATCCTGGACTTTGACGTGGCC
CTGCTGGAGTTAGCCCAGCCATTGGTCTTCAACAAGTACATCCAACCGGTTTGTCTGCCCCTGGCCATCC
ACAAGTTCCCAGTCGGCCGGAAGTGTATGATCTCAGGCTGGGGCAACATGCAGGAGGGAAATGCCACCAA
GCCTGACATCTTGCAGAAGGCGTCCGTGGGCATCATAGAGCAGAAGATGTGTGGAGCCCTGTACAACTTC
TCCCTCACTGACCGCATGCTCTGTGCTGGCTTCCTGGAGGGCAGAGTTGACTCCTGCCAGGGTGATTCTG
GTGGCCCCTTGGCATGTGAAGAGACACCTGGTGTCTTTTACCTGGCTGGCATCGTGAGCTGGGGCATTGG
CTGTGCCCAGGCTAAGAAGCCTGGCGTATATGCACGAATCACACGCCTCAAGGACTGGATCCTGAAAGCG
ATGTCCTCAGACCCCAGCTCCATGGCTCGCCCCCACACCTCCAGCACACGGCTCATCCCTAGTGAGCCCC
CCAAAACCACAGCTGCTGGCCTCATTATCCCAGAGGCCACCACCAGCAGACTTGCTACCCCCAGGGCCAC
CATCAGAGTGACCACTAGACCACTCAACACAACACTGTCTGCCAGGAGTACCACCACCAGGGGACAGACA
GCAGCCCCAAGTGCACCGGGCACCACCATACACTCTCACCTGCCAGATTGTGGCCTGGCACCCCCCGGGG
CCCTGACCCGGATAGTGGGCGGCAGCGCAGCCTCGCTTGGGGAGTGGCCCTGGCAAGTGAGCCTGTGGCT
GCGGCGCAGGGAGCACCGATGTGGGGCGGTACTGGTGGCCGAGAGGTGGCTTCTGTCTGCAGCACACTGT
TTCGACATCTATGGGGACCCTATGCAGTGGGCGGCCTTCCTGGGCACCCCATTCCTGAGCAGCACGGAGG
GCCAGTTGGAGCGCGTGGCACGCATCTATCGCCACCCGTTCTACAACATCTACACACTGGACTATGACGT
GGCACTGCTGGAGCTGGCGGGACCCGTGCGCCGCAGCCGCTTGGTGCGACCCATCTGCCTACCAGGTCCC
GCAAGGCCCCCTGACGGCGCTCGATGCGTCATCACCGGCTGGGGCTCGCTGCGCGAGGGAGGCTCCATGG
CGCGGCAGCTGCAGAAGGCCGCAGTAAGGGTCCTCAGTGAACAGACATGTCGCCGCTTCTACCCAGTGCA
GATCAGCAGCCGTATGTTGTGTGCAGGCTTCCCACAGGGTGGCGTGGACAGCTGCTCGGGTGATGCAGGG
GGACCCCTGGCCTGCAGGGAGCCATCTGGCCAATGGGTGCTAACTGGGGTCACCAGCTGGGGCTACGGCT
GTGGCAGGCCCCACTTCCCAGGTGTCTACACTCGAGTGGCTGCTGTGCTGGGATGGATAGGCCAGAACAT
CCAGGAATGA

Translation (1099 aa):
MEPTAPDLQLVPEVTKAVSVSAPDPGPCRTAVIAVVGISMAIVTLGVLSAFFSAQGAHVEHIAELHGIRF
TSSLQQENSDFYRLLTHALQTLFVSSFQKTELESSCAGCTVLSYRDGNSTVIVHFRLHFLLRALQPLSLK
QEADILQKGIQARLQEQGLSLAAYGTIVSVELTGRCEGPVTERDLKSGHCPGNVFSCQNGQCVSKENPEC
DDRVDCSDESDEAQCDCGWQPAWRSAGRIVGGVEAAPGEFPWQVSLRENHEHFCGATIIGARWLVSAAHC
FNEFQDPAQWAAQAGSVHLSGSEASAVRTRVLRIAKHPAYDADTADFDVAVLELARPLPFGRYVQPACLP
AATHVFPPGKKCLISGWGYLKEDFLVKPEVLQKATVELLDQSLCSSLYGHSLTDRMVCAGYLDGKVDSCQ
GDSGGPLVCEEPSGRFFLAGIVSWGIGCAEARRPGVYTRVTRLRDWILEVTSAADMPVVPTATPAPATPS
TPWPTSPESWAPNTFAKPTAAPSPVPLHPSTTAKPQECGARPAMDKPTRIVGGISAVSGEVPWQASLKEG
PRHFCGATVVGDRWLLSAAHCFNHTKVEQVQAHLGTVSLLGVGGSPVKLGLRRVALHPRYNPGILDFDVA
LLELAQPLVFNKYIQPVCLPLAIHKFPVGRKCMISGWGNMQEGNATKPDILQKASVGIIEQKMCGALYNF
SLTDRMLCAGFLEGRVDSCQGDSGGPLACEETPGVFYLAGIVSWGIGCAQAKKPGVYARITRLKDWILKA
MSSDPSSMARPHTSSTRLIPSEPPKTTAAGLIIPEATTSRLATPRATIRVTTRPLNTTLSARSTTTRGQT
AAPSAPGTTIHSHLPDCGLAPPGALTRIVGGSAASLGEWPWQVSLWLRRREHRCGAVLVAERWLLSAAHC
FDIYGDPMQWAAFLGTPFLSSTEGQLERVARIYRHPFYNIYTLDYDVALLELAGPVRRSRLVRPICLPGP
ARPPDGARCVITGWGSLREGGSMARQLQKAAVRVLSEQTCRRFYPVQISSRMLCAGFPQGGVDSCSGDAG
GPLACREPSGQWVLTGVTSWGYGCGRPHFPGVYTRVAAVLGWIGQNIQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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