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Report for CCDS48809.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48809.1 Public Mus musculus 11 Guk1 23 108 98 CCDS HistoryNCBI Gene:14923Re-query CCDS DB by CCDS ID:48809.1Re-query CCDS DB by GeneID:14923See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48809.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000170895.2 ENSMUSP00000130214.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170895.2Link to Ensembl Protein Viewer:ENSMUSP00000130214.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000170895Re-query CCDS DB by Protein ID:ENSMUSP00000130214
Original member NCBI NM_001159410.1 NP_001152882.1 Updated not alive Link to Nucleotide Sequence:NM_001159410.1Link to Protein Sequence:NP_001152882.1Re-query CCDS DB by Nucleotide ID:NM_001159410Re-query CCDS DB by Protein ID:NP_001152882
Current member NCBI NM_001159410.2 NP_001152882.1 Accepted alive Link to Nucleotide Sequence:NM_001159410.2Link to Protein Sequence:NP_001152882.1Re-query CCDS DB by Nucleotide ID:NM_001159410Re-query CCDS DB by Protein ID:NP_001152882Link to BLAST:NP_001152882.1

Chromosomal Locations for CCDS 48809.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 59184152 59184187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59184436 59184521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59185029 59185113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59185194 59185332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59185942 59186038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59186400 59186441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59186774 59186887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59187703 59187727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGGAGGCTGCAACACATCAAGTAGGCATGGCAGGACCTAGGCCAGTAGTGCTGAGCGGGCCGTCAGGGG
CAGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGAGCACAGCAGCATCTTCGGCTTCAGCGTGTCTCA
TACTACAAGGAACCCACGACCTGGTGAAGAAGATGGCAAAGATTACTACTTTGTGACCAGGGAGATGATG
CAGCGTGATATTGCAGCAGGGGACTTCATTGAGCATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCA
AGGAAGCTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCGTGCTAGATGTCGACCTACAAGGTGTGCG
CAGCATCAAGAAGACTGATCTGTGTCCCATCTACATCTTTGTGCAGCCTCCCTCGCTGGACGTGCTGGAG
CAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAG
ACATGGAGAGCAGCAAGGAGCCTGGCTTGTTTGACCTGGTGATCATCAATGACGACCTGGATAAAGCCTA
TGCAACCCTGAAGCAGGCGCTCTCTGAGGAAATCAAGAAAGCACAGGGAACTGGCCACGCCTGA

Translation (207 aa):
MEAATHQVGMAGPRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMM
QRDIAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLE
QRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQALSEEIKKAQGTGHA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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