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Report for CCDS49307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49307.1 Public Mus musculus 13 Ube2ql1 23 108 98 CCDS HistoryNCBI Gene:76980Re-query CCDS DB by CCDS ID:49307.1Re-query CCDS DB by GeneID:76980See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49307.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065118.6 ENSMUSP00000070906.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065118.6Link to Ensembl Protein Viewer:ENSMUSP00000070906.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000065118Re-query CCDS DB by Protein ID:ENSMUSP00000070906
Original member Current member NCBI NM_001145162.1 NP_001138634.1 Accepted alive Link to Nucleotide Sequence:NM_001145162.1Link to Protein Sequence:NP_001138634.1Re-query CCDS DB by Nucleotide ID:NM_001145162Re-query CCDS DB by Protein ID:NP_001138634Link to BLAST:NP_001138634.1

Chromosomal Locations for CCDS 49307.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 69704042 69704173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69738558 69739340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGGCCACGCTGCTCCGTAAAATCGGGCTCATTCGCCTGCACAACCGGGACACCGAGGACCCCAAGCACC
ACCACAACCACCGTGGCGGAGGCGGCGGCCAGCAGAGCGCATCGCTGCGCGGCAAAGGTGGTGGTAAGAG
CAGCGGCCACAAGCAGCAGCAGCAACAGCAGCACCCCGGGGGCTCAGGCGACGCCAGCCCGGGGCCCGGC
AAGGGCAAGAGTAAGCGCGCGGCGGAACTGGCCGCGCGCGACAAGCAGCCGCAGCCAGCCGCGGGGGCGG
CGGGGGCGGCGGGCGCCGGGGGCCCCCGGGAGCGGGCGGCGGGCGCCAGGGCGGGGCCGGGCCCCGCGGT
GGCCGCGGCGGCGGCGGGCGGCAGCCTAGTGCCCGCGGCGCGCCAGCAGCACTGCACACAGGTGCGCAGC
CGGCGGCTCATGAAGGAGCTCCAGGACATCGCGCGCCTCAGCGACCGCTTCATCTCGGTGGAGCTGGTAA
ACGAGAACCTCTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACAT
GAAGGAGACCAACACAGAGTTCATCCTGCTCAACCTCACCTTCCCCGATAACTTCCCCTTCTCGCCGCCC
TTCATGCGGGTGCTCAGCCCGCGACTGGAGAACGGCTACGTGCTGGACGGAGGCGCCATCTGCATGGAGC
TGCTCACGCCGCGCGGCTGGTCCAGCGCCTACACGGTGGAGGCCGTCATGCGCCAGTTTGCTGCCAGCCT
GGTCAAGGGCCAGGGACGGATCTGCAGAAAAGCTGGCAAGTCAAAAAAGTCCTTCAGCCGCAAGGAAGCT
GAAGCAACCTTTAAGAGTTTGGTGAAGACACATGAGAAATACGGCTGGGTCACCCCACCCGTGTCTGATG
GCTGA

Translation (304 aa):
MATLLRKIGLIRLHNRDTEDPKHHHNHRGGGGGQQSASLRGKGGGKSSGHKQQQQQQHPGGSGDASPGPG
KGKSKRAAELAARDKQPQPAAGAAGAAGAGGPRERAAGARAGPGPAVAAAAAGGSLVPAARQQHCTQVRS
RRLMKELQDIARLSDRFISVELVNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDNFPFSPP
FMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGRICRKAGKSKKSFSRKEA
EATFKSLVKTHEKYGWVTPPVSDG


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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