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Report for CCDS50591.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50591.1 Public Mus musculus 2 Rbms1 23 108 98 CCDS HistoryNCBI Gene:56878Re-query CCDS DB by CCDS ID:50591.1Re-query CCDS DB by GeneID:56878See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50591.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028347.12 ENSMUSP00000028347.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028347.12Link to Ensembl Protein Viewer:ENSMUSP00000028347.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000028347Re-query CCDS DB by Protein ID:ENSMUSP00000028347
Original member Current member NCBI NM_020296.2 NP_064692.2 Accepted alive Link to Nucleotide Sequence:NM_020296.2Link to Protein Sequence:NP_064692.2Re-query CCDS DB by Nucleotide ID:NM_020296Re-query CCDS DB by Protein ID:NP_064692Link to BLAST:NP_064692.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064692.2 403 Q91W59-1 403 100% 0 0

Chromosomal Locations for CCDS 50591.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 60753737 60753814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60755416 60755496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60756436 60756546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60758804 60758854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60762053 60762146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60762270 60762319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60763236 60763342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60779731 60779810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60781861 60782018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60792689 60792780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60797684 60797742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60842297 60842472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60962691 60962765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1212 nt):
ATGGGCAAAGTGTGGAAACAACAGATGTACCCTCAGTACGCCACCTATTACTACCCCCAGTATCTGCAAG
CCAAGCAGTCTCTGGTCCCAGCACACCCCATGGCCCCACCCAGTCCCAGCACCACCAGCAGTAATAACAA
CAGTAGCAGCAGTAGCAACTCAGGATGGGATCAGCTGAGCAAGACAAACCTCTACATCCGAGGCCTGCCC
CCCAATACCACTGATCAAGACCTGGTGAAGCTCTGCCAACCATATGGGAAGATCGTGTCCACAAAGGCGA
TTTTGGATAAGGCCACCAACAAGTGCAAAGGTTATGGTTTTGTTGACTTTGACAGTCCTGCAGCAGCCCA
GAAAGCTGTCTCCGCCCTGAAGGCGAATGGAGTCCAGGCTCAGATGGCAAAGCAACAGGAACAAGATCCT
ACCAACCTGTACATTTCTAACCTGCCGCTGTCCATGGATGAGCAGGAACTTGAAAATATGCTCAAACCCT
TTGGACAAGTTATTTCTACAAGGGTCCTACGTGATTCCAGTGGTGCCAGCCGTGGTGTTGGCTTTGCCAG
GATGGAATCAACGGAAAAATGCGAAGCTGTAATTGGTCATTTTAATGGAAAATTCATCAAGACCCCACCA
GGAGTTTCTGCTCCTACAGAACCTTTACTGTGCAAGTTTGCGGATGGAGGACAGAAAAAGAGACAGAACC
CAAACAAGTACATCCCTAACGGGCGGCCATGGCCCAGAGATGGAGAGGCTGGAATGACACTCACTTATGA
CCCGACTACAGCTGCTCTACACAACGGATTTTATCCTTCACCATACAGTATTGCCACAAACCGAATGATC
ACTCAAACTTCTCTTACACCCTATATTGCATCTCCTGTATCTGCCTACCAGGTGCAGAGCCCCTCTTGGA
TGCAGCCTCAGCCGTACATTCTGCAGCATCCTGGTGCCGTGTTAACTCCCTCAATGGAACATACCATGTC
ACTACAACCTGCTTCCATGATCAGCCCTCTGGCTCAGCAGATGAGTCATCTGTCACTGGGCAGCACCGGA
ACATACATGCCTGCAACATCAGCCATGCAAGGAGCCTACTTGCCACAGTATACACACATGCAGACCGCGG
CGGTGCCCGTTGAGGAAGCAAGTGGCCAGCAGCAGGTGGCTGTGGAGACGTCTAATGACCATTCTCCATA
TACCTTTCCACCCAATAAGTAA

Translation (403 aa):
MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLP
PNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKANGVQAQMAKQQEQDP
TNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPP
GVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWPRDGEAGMTLTYDPTTAALHNGFYPSPYSIATNRMI
TQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTG
TYMPATSAMQGAYLPQYTHMQTAAVPVEEASGQQQVAVETSNDHSPYTFPPNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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