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Report for CCDS51051.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51051.1 Public Mus musculus 3 Eeig2 23 108 98 CCDS HistoryNCBI Gene:329739Re-query CCDS DB by CCDS ID:51051.1Re-query CCDS DB by GeneID:329739See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 51051.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000171143.1 ENSMUSP00000131904.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000171143.1Link to Ensembl Protein Viewer:ENSMUSP00000131904.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000171143Re-query CCDS DB by Protein ID:ENSMUSP00000131904
Original member Current member NCBI NM_001163567.1 NP_001157039.1 Accepted alive Link to Nucleotide Sequence:NM_001163567.1Link to Protein Sequence:NP_001157039.1Re-query CCDS DB by Nucleotide ID:NM_001163567Re-query CCDS DB by Protein ID:NP_001157039Link to BLAST:NP_001157039.1

Chromosomal Locations for CCDS 51051.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 108975300 108975342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108978845 108978914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108979681 108979808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108980075 108980294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108981144 108981239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108985312 108985415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108988311 108988357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108992626 108992742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 108997035 108997064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 109003300 109003420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 109027185 109027321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGATGAAGAAGAAGAAGTTTAAGTTTAAGGTGGACTTCGAGCTCGAGGAGCTCTCCTCGGTGCCCTTCG
TCAACGGGGTCCTCTTCTGCAAGATGCGGCTGCTGGACGGCGGCAGCTTCACCGCCGAGTCCTCCAGGGA
GGTGGTGCAAGCAAATTGTGTTCACTGGAGAAAGAAGTTCTCGTTTATGTGCAAAATGAGCGCCAGCGCC
TCCACCGGCATCCTGGATCCTTGTATCTACAGAGTGTCTGTACGGAAGGAATTAAAAGGTGGGAAAGCGT
ATGCAAAGCTGGGCTTTGCAGATCTAAACCTGGCAGAGTTTGCTGGATCAGGAAATACCACCCGCCGCTG
TTTACTGGAAGGCTATGATACCAAAAATACAAGACAGGACAATTCCATCCTTAAAGTTTTGATCAGTATG
CAGCTGATGTCTGGTGACCCGTGTTTTAAAACGCCTCCTTCCACATCCATGTCAATACCAATCGCTGGGG
AATCTGAGTCTCTGGAAGAGGACAGGAAAGGTGGCGAGACCCTCAAAGTACATCTTGGAATAGCAGATCT
TTCAGCAAAGAGTGCCTCTGTTCCAGATGAACTTGGTGCCTGGGGACACTCTAGAACATCAAGCTATGCA
AGCCAGCAGTCCAAAGTATCAGGCTATAGCACATGTCACTCCCGGTCATCCAGTTTCTCCGAGTTCTGCC
ACAGGAGAAATACCTCAGTGGGAAGCACGTCAACGGGGATTGAAAGCATTCTCGAGCCATGTGACGAGAC
TGAGCCAATCACAGCTGAACCAAGTCCAGACCCCACCGCTGCTGCCGCCACCGCCACCACCACCACCGCT
AAGGAAGAGGAAGCTTCCGAGAAACTCGCCAGATGTCCAGTGAAGCAAGATTCTGTTGAGTCGCAGCTGA
AGCGGGTTGATGACACCAGAGTGGATGCTGATGACATCGTGGAGAAAATCCTACAGAGTCAGGACTTCAG
CCTCGACTCCAGTGCAGAAGAAGAAGGGCTGAGGTTGTTCGTGGGACCTGGGGGAAGTACAACCTTTGGC
AGCCACCACCTTCCAAACAGGGTAGGATCTGGAGCCTATGAACAGGTTGTGATCAAACGCTAG

Translation (370 aa):
MMKKKKFKFKVDFELEELSSVPFVNGVLFCKMRLLDGGSFTAESSREVVQANCVHWRKKFSFMCKMSASA
STGILDPCIYRVSVRKELKGGKAYAKLGFADLNLAEFAGSGNTTRRCLLEGYDTKNTRQDNSILKVLISM
QLMSGDPCFKTPPSTSMSIPIAGESESLEEDRKGGETLKVHLGIADLSAKSASVPDELGAWGHSRTSSYA
SQQSKVSGYSTCHSRSSSFSEFCHRRNTSVGSTSTGIESILEPCDETEPITAEPSPDPTAAAATATTTTA
KEEEASEKLARCPVKQDSVESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAEEEGLRLFVGPGGSTTFG
SHHLPNRVGSGAYEQVVIKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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