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Report for CCDS51843.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51843.1 Public Mus musculus 6 Mgll 23 108 98 CCDS HistoryNCBI Gene:23945Re-query CCDS DB by CCDS ID:51843.1Re-query CCDS DB by GeneID:23945See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 51843.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000163271.7 ENSMUSP00000127374.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000163271.7Link to Ensembl Protein Viewer:ENSMUSP00000127374.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000163271Re-query CCDS DB by Protein ID:ENSMUSP00000127374
Original member NCBI NM_001166251.1 NP_001159723.1 Updated not alive Link to Nucleotide Sequence:NM_001166251.1Link to Protein Sequence:NP_001159723.1Re-query CCDS DB by Nucleotide ID:NM_001166251Re-query CCDS DB by Protein ID:NP_001159723
Current member NCBI NM_001166251.2 NP_001159723.1 Accepted alive Link to Nucleotide Sequence:NM_001166251.2Link to Protein Sequence:NP_001159723.1Re-query CCDS DB by Nucleotide ID:NM_001166251Re-query CCDS DB by Protein ID:NP_001159723Link to BLAST:NP_001159723.1

Chromosomal Locations for CCDS 51843.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 88725151 88725178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 88725701 88725845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 88764596 88764702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 88808011 88808147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 88809336 88809446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 88818574 88818663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 88823191 88823406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 88825651 88825776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGCAAAAGCCAAGACTAATGGAAACAGGGCCTAAAGACCCCTGCAGGATGCCTGAGGCAAGTTCACCCA
GGCGAACTCCACAGAATGTTCCCTACCAGGACCTGCCTCACCTGGTCAATGCAGACGGACAGTACCTCTT
TTGTAGATACTGGAAGCCCAGTGGCACACCCAAGGCCCTCATCTTTGTGTCCCATGGAGCTGGGGAACAC
TGTGGCCGTTATGATGAGCTGGCTCATATGTTGAAGGGGCTGGACATGCTGGTATTTGCCCATGACCATG
TTGGCCATGGGCAGAGTGAGGGAGAGAGGATGGTGGTGTCGGACTTCCAAGTTTTTGTCAGAGATGTGCT
GCAACACGTGGACACCATCCAGAAGGACTACCCCGACGTCCCCATCTTCCTCCTGGGCCACTCCATGGGC
GGTGCCATCTCCATCCTAGTGGCTGCAGAGAGGCCAACCTACTTTTCTGGCATGGTCCTGATTTCACCTC
TGGTCCTTGCCAATCCGGAATCTGCATCGACTTTGAAGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCT
GCCAAATATGACCTTGGGGCGCATTGACTCCAGCGTGCTGTCTCGGAACAAGTCGGAGGTTGACCTGTAC
AACTCTGACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATGCCGTCG
CAAGAGTGGAGCGAGCAATGCCCAGGCTGACACTGCCATTCCTGCTGCTGCAGGGTTCTGCTGACCGGCT
TTGCGACAGCAAAGGTGCCTACCTGCTCATGGAATCATCCCGGAGTCAGGACAAAACACTCAAGATGTAT
GAAGGTGCCTATCACGTCCTCCACAGGGAGCTTCCGGAAGTGACCAACTCCGTCCTCCATGAAGTAAACT
CGTGGGTGTCTCACAGGATAGCAGCAGCAGGAGCTGGGTGTCCACCCTGA

Translation (319 aa):
MQKPRLMETGPKDPCRMPEASSPRRTPQNVPYQDLPHLVNADGQYLFCRYWKPSGTPKALIFVSHGAGEH
CGRYDELAHMLKGLDMLVFAHDHVGHGQSEGERMVVSDFQVFVRDVLQHVDTIQKDYPDVPIFLLGHSMG
GAISILVAAERPTYFSGMVLISPLVLANPESASTLKVLAAKLLNFVLPNMTLGRIDSSVLSRNKSEVDLY
NSDPLVCRAGLKVCFGIQLLNAVARVERAMPRLTLPFLLLQGSADRLCDSKGAYLLMESSRSQDKTLKMY
EGAYHVLHRELPEVTNSVLHEVNSWVSHRIAAAGAGCPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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