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Report for CCDS5229.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5229.1 Public Homo sapiens 6 AKAP12 24 110 108 CCDS HistoryNCBI Gene:9590Re-query CCDS DB by CCDS ID:5229.1Re-query CCDS DB by GeneID:9590See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5229.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253332.5 ENSP00000253332.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000253332.5Link to Ensembl Protein Viewer:ENSP00000253332.1Re-query CCDS DB by Nucleotide ID:ENST00000253332Re-query CCDS DB by Protein ID:ENSP00000253332
Original member Current member EBI ENST00000402676.7 ENSP00000384537.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000402676.7Link to Ensembl Protein Viewer:ENSP00000384537.2Re-query CCDS DB by Nucleotide ID:ENST00000402676Re-query CCDS DB by Protein ID:ENSP00000384537
Original member Current member NCBI NM_005100.4 NP_005091.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005100.4Link to Protein Sequence:NP_005091.2Re-query CCDS DB by Nucleotide ID:NM_005100Re-query CCDS DB by Protein ID:NP_005091Link to BLAST:NP_005091.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005091.2 1782 Q02952-1 1782 100% 0 0

Chromosomal Locations for CCDS 5229.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 151240563 151240724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 151305747 151305903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 151348711 151353740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5349 nt):
ATGGGCGCCGGGAGCTCCACCGAGCAGCGCAGCCCGGAGCAGCCGCCCGAGGGGAGCTCCACGCCGGCTG
AGCCCGAGCCCAGCGGCGGCGGCCCCTCGGCCGAGGCGGCGCCAGACACCACCGCGGACCCCGCCATCGC
TGCCTCGGACCCCGCCACCAAGCTCCTACAGAAGAATGGTCAGCTGTCCACCATCAATGGCGTAGCTGAG
CAAGATGAGCTCAGCCTCCAGGAGGGTGACCTAAATGGCCAGAAAGGAGCCCTGAACGGTCAAGGAGCCC
TAAACAGCCAGGAGGAAGAAGAAGTCATTGTCACAGAGGTTGGACAGAGAGACTCTGAAGATGTGAGCAA
AAGAGACTCCGATAAAGAGATGGCTACTAAGTCAGCGGTTGTTCACGACATCACAGATGATGGGCAGGAG
GAGACACCCGAAATAATCGAACAGATTCCTTCTTCAGAAAGCAATTTAGAAGAGCTAACACAACCCACTG
AGTCCCAGGCTAATGATATTGGATTTAAGAAGGTGTTTAAGTTTGTTGGCTTTAAATTCACTGTGAAAAA
GGATAAGACAGAGAAGCCTGACACTGTCCAGCTACTCACTGTGAAGAAAGATGAAGGGGAGGGAGCAGCA
GGGGCTGGCGACCACAAGGACCCCAGCCTTGGGGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCAAAC
AATCTACAGAGAAACCCGAAGAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCCCCCAGCCGA
ATCTGGCCAAGCAGTGGAGGAATGCAAAGAGGAAGGAGAAGAGAAACAAGAAAAAGAACCTAGCAAGTCT
GCAGAATCTCCGACTAGTCCCGTGACCAGTGAAACAGGATCAACCTTCAAAAAATTCTTCACTCAAGGTT
GGGCCGGCTGGCGCAAAAAGACCAGTTTCAGGAAGCCGAAGGAGGATGAAGTGGAAGCTTCAGAGAAGAA
AAAGGAACAAGAGCCAGAAAAAGTAGACACAGAAGAAGACGGAAAGGCAGAGGTTGCCTCCGAGAAACTG
ACCGCCTCCGAGCAAGCCCACCCACAGGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTTATCAGCTGAAT
ATGAGAAAGTTGAGCTGCCCTCAGAGGAGCAAGTCAGTGGCTCGCAGGGACCTTCTGAAGAGAAACCTGC
TCCGTTGGCGACAGAAGTGTTTGATGAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGCCGAAGTCCAC
GTCAGCACCGTGGAGGAGAGAACCGAAGAGCAGAAAACGGAGGTGGAAGAAACAGCAGGGTCTGTGCCAG
CTGAAGAATTGGTTGAAATGGATGCAGAACCTCAGGAAGCTGAACCTGCCAAGGAGCTGGTGAAGCTCAA
AGAAACGTGTGTTTCCGGAGAGGACCCTACACAGGGAGCTGACCTCAGTCCTGATGAGAAGGTGCTGTCC
AAACCCCCCGAAGGCGTTGTGAGTGAGGTGGAAATGCTGTCATCACAGGAGAGAATGAAGGTGCAGGGAA
GTCCACTAAAGAAGCTTTTTACCAGCACTGGCTTAAAAAAGCTTTCTGGAAAGAAACAGAAAGGGAAAAG
AGGAGGAGGAGACGAGGAATCAGGGGAGCACACTCAGGTTCCAGCCGATTCTCCGGACAGCCAGGAGGAG
CAAAAGGGCGAGAGCTCTGCCTCATCCCCTGAGGAGCCCGAGGAGATCACGTGTCTGGAAAAGGGCTTAG
CCGAGGTGCAGCAGGATGGGGAAGCTGAAGAAGGAGCTACTTCCGATGGAGAGAAAAAAAGAGAAGGTGT
CACTCCCTGGGCATCATTCAAAAAGATGGTGACGCCCAAGAAGCGTGTTAGACGGCCTTCGGAAAGTGAT
AAAGAAGATGAGCTGGACAAGGTCAAGAGCGCTACCTTGTCTTCCACCGAGAGCACAGCCTCTGAAATGC
AAGAAGAAATGAAAGGGAGCGTGGAAGAGCCAAAGCCGGAAGAACCAAAGCGCAAGGTGGATACCTCAGT
ATCTTGGGAAGCTTTAATTTGTGTGGGATCATCCAAGAAAAGAGCAAGGAGAGGGTCCTCTTCTGATGAG
GAAGGGGGACCAAAAGCAATGGGAGGAGACCACCAGAAAGCTGATGAGGCCGGAAAAGACAAAGAGACGG
GGACAGACGGGATCCTTGCTGGTTCCCAAGAACATGATCCAGGGCAGGGAAGTTCCTCCCCGGAGCAAGC
TGGAAGCCCTACCGAAGGGGAGGGCGTTTCCACCTGGGAGTCATTTAAAAGGTTAGTCACGCCAAGAAAA
AAATCAAAGTCCAAGCTGGAAGAGAAAAGCGAAGACTCCATAGCTGGGTCTGGTGTAGAACATTCCACTC
CAGACACTGAACCCGGTAAAGAAGAATCCTGGGTCTCAATCAAGAAGTTTATTCCTGGACGAAGGAAGAA
AAGGCCAGATGGGAAACAAGAACAAGCCCCTGTTGAAGACGCAGGGCCAACAGGGGCCAACGAAGATGAC
TCTGATGTCCCGGCCGTGGTCCCTCTGTCTGAGTATGATGCTGTAGAAAGGGAGAAAATGGAGGCACAGC
AAGCCCAAAAAAGCGCAGAGCAGCCCGAGCAGAAGGCAGCCACTGAGGTGTCCAAGGAGCTCAGCGAGAG
TCAGGTTCATATGATGGCAGCAGCTGTCGCTGACGGGACGAGGGCAGCTACCATTATTGAAGAAAGGTCT
CCTTCTTGGATATCTGCTTCAGTGACAGAACCTCTTGAACAAGTAGAAGCTGAAGCCGCACTGTTAACTG
AGGAGGTATTGGAAAGAGAAGTAATTGCAGAAGAAGAACCCCCCACGGTTACTGAACCTCTGCCAGAGAA
CAGAGAGGCCCGGGGCGACACGGTCGTTAGTGAGGCGGAATTGACCCCCGAAGCTGTGACAGCTGCAGAA
ACTGCAGGGCCATTGGGTGCCGAAGAAGGAACCGAAGCATCTGCTGCTGAAGAGACCACAGAAATGGTGT
CAGCAGTCTCCCAGTTAACCGACTCCCCAGACACCACAGAGGAGGCCACTCCGGTGCAGGAGGTGGAAGG
TGGCGTACCTGACATAGAAGAGCAAGAGAGGCGGACTCAAGAGGTCCTCCAGGCAGTGGCAGAAAAAGTG
AAAGAGGAATCCCAGCTGCCTGGCACCGGTGGGCCAGAAGATGTGCTTCAGCCTGTGCAGAGAGCAGAGG
CAGAAAGACCAGAAGAGCAGGCTGAAGCGTCGGGTCTGAAGAAAGAGACGGATGTAGTGTTGAAAGTAGA
TGCTCAGGAGGCAAAAACTGAGCCTTTTACACAAGGGAAGGTGGTGGGGCAGACCACCCCAGAAAGCTTT
GAAAAAGCTCCTCAAGTCACAGAGAGCATAGAGTCCAGTGAGCTTGTAACCACTTGTCAAGCCGAAACCT
TAGCTGGGGTAAAATCACAGGAGATGGTGATGGAACAGGCTATCCCCCCTGACTCGGTGGAAACCCCTAC
AGACAGTGAGACTGATGGAAGCACCCCCGTAGCCGACTTTGACGCACCAGGCACAACCCAGAAAGACGAG
ATTGTGGAAATCCATGAGGAGAATGAGGTCGCATCTGGTACCCAGTCAGGGGGCACAGAAGCAGAGGCAG
TTCCTGCACAGAAAGAGAGGCCTCCAGCACCTTCCAGTTTTGTGTTCCAGGAAGAAACTAAAGAACAATC
AAAGATGGAAGACACTCTAGAGCATACAGATAAAGAGGTGTCAGTGGAAACTGTATCCATTCTGTCAAAG
ACTGAGGGGACTCAAGAGGCTGACCAGTATGCTGATGAGAAAACCAAAGACGTACCATTTTTCGAAGGAC
TTGAGGGGTCTATAGACACAGGCATAACAGTCAGTCGGGAAAAGGTCACTGAAGTTGCCCTTAAAGGTGA
AGGGACAGAAGAAGCTGAATGTAAAAAGGATGATGCTCTTGAACTGCAGAGTCACGCTAAGTCTCCTCCA
TCCCCCGTGGAGAGAGAGATGGTAGTTCAAGTCGAAAGGGAGAAAACAGAAGCAGAGCCAACCCATGTGA
ATGAAGAGAAGCTTGAGCACGAAACAGCTGTTACCGTATCTGAAGAGGTCAGTAAGCAGCTCCTCCAGAC
AGTGAATGTGCCCATCATAGATGGGGCAAAGGAAGTCAGCAGTTTGGAAGGAAGCCCTCCTCCCTGCCTA
GGTCAAGAGGAGGCAGTATGCACCAAAATTCAAGTTCAGAGCTCTGAGGCATCATTCACTCTAACAGCGG
CTGCAGAGGAGGAAAAGGTCTTAGGAGAAACTGCCAACATTTTAGAAACAGGTGAAACGTTGGAGCCTGC
AGGTGCACATTTAGTTCTGGAAGAGAAATCCTCTGAAAAAAATGAAGACTTTGCCGCTCATCCAGGGGAA
GATGCTGTGCCCACAGGGCCCGACTGTCAGGCAAAATCGACACCAGTGATAGTATCTGCTACTACCAAGA
AAGGCTTAAGTTCCGACCTGGAAGGAGAGAAAACCACATCACTGAAGTGGAAGTCAGATGAAGTCGATGA
GCAGGTTGCTTGCCAGGAGGTCAAAGTGAGTGTAGCAATTGAGGATTTAGAGCCTGAAAATGGGATTTTG
GAACTTGAGACCAAAAGCAGTAAACTTGTCCAAAACATCATCCAGACAGCCGTTGACCAGTTTGTACGTA
CAGAAGAAACAGCCACCGAAATGTTGACGTCTGAGTTACAGACACAAGCTCACGTGATAAAAGCTGACAG
CCAGGACGCTGGACAGGAAACGGAGAAAGAAGGAGAGGAACCTCAGGCCTCTGCACAGGATGAAACACCA
ATTACTTCAGCCAAAGAGGAGTCAGAGTCAACCGCAGTGGGACAAGCACATTCTGATATTTCCAAAGACA
TGAGTGAAGCCTCAGAAAAGACCATGACTGTTGAGGTAGAAGGTTCCACTGTAAATGATCAGCAGCTGGA
AGAGGTCGTCCTCCCATCTGAGGAAGAGGGAGGTGGAGCTGGAACAAAGTCTGTGCCAGAAGATGATGGT
CATGCCTTGTTAGCAGAAAGAATAGAGAAGTCACTAGTTGAACCGAAAGAAGATGAAAAAGGTGATGATG
TTGATGACCCTGAAAACCAGAACTCAGCCCTGGCTGATACTGATGCCTCAGGAGGCTTAACCAAAGAGTC
CCCAGATACAAATGGACCAAAACAAAAAGAGAAGGAGGATGCCCAGGAAGTAGAATTGCAGGAAGGAAAA
GTGCACAGTGAATCAGATAAAGCGATCACACCCCAAGCACAGGAGGAGTTACAGAAACAAGAGAGAGAAT
CTGCAAAGTCAGAACTTACAGAATCTTAA

Translation (1782 aa):
MGAGSSTEQRSPEQPPEGSSTPAEPEPSGGGPSAEAAPDTTADPAIAASDPATKLLQKNGQLSTINGVAE
QDELSLQEGDLNGQKGALNGQGALNSQEEEEVIVTEVGQRDSEDVSKRDSDKEMATKSAVVHDITDDGQE
ETPEIIEQIPSSESNLEELTQPTESQANDIGFKKVFKFVGFKFTVKKDKTEKPDTVQLLTVKKDEGEGAA
GAGDHKDPSLGAGEAASKESEPKQSTEKPEETLKREQSHAEISPPAESGQAVEECKEEGEEKQEKEPSKS
AESPTSPVTSETGSTFKKFFTQGWAGWRKKTSFRKPKEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKL
TASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEKIEVHQEEVVAEVH
VSTVEERTEEQKTEVEETAGSVPAEELVEMDAEPQEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLS
KPPEGVVSEVEMLSSQERMKVQGSPLKKLFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPADSPDSQEE
QKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGATSDGEKKREGVTPWASFKKMVTPKKRVRRPSESD
KEDELDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPKRKVDTSVSWEALICVGSSKKRARRGSSSDE
EGGPKAMGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSPTEGEGVSTWESFKRLVTPRK
KSKSKLEEKSEDSIAGSGVEHSTPDTEPGKEESWVSIKKFIPGRRKKRPDGKQEQAPVEDAGPTGANEDD
SDVPAVVPLSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGTRAATIIEERS
PSWISASVTEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREARGDTVVSEAELTPEAVTAAE
TAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEEATPVQEVEGGVPDIEEQERRTQEVLQAVAEKV
KEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASGLKKETDVVLKVDAQEAKTEPFTQGKVVGQTTPESF
EKAPQVTESIESSELVTTCQAETLAGVKSQEMVMEQAIPPDSVETPTDSETDGSTPVADFDAPGTTQKDE
IVEIHEENEVASGTQSGGTEAEAVPAQKERPPAPSSFVFQEETKEQSKMEDTLEHTDKEVSVETVSILSK
TEGTQEADQYADEKTKDVPFFEGLEGSIDTGITVSREKVTEVALKGEGTEEAECKKDDALELQSHAKSPP
SPVEREMVVQVEREKTEAEPTHVNEEKLEHETAVTVSEEVSKQLLQTVNVPIIDGAKEVSSLEGSPPPCL
GQEEAVCTKIQVQSSEASFTLTAAAEEEKVLGETANILETGETLEPAGAHLVLEEKSSEKNEDFAAHPGE
DAVPTGPDCQAKSTPVIVSATTKKGLSSDLEGEKTTSLKWKSDEVDEQVACQEVKVSVAIEDLEPENGIL
ELETKSSKLVQNIIQTAVDQFVRTEETATEMLTSELQTQAHVIKADSQDAGQETEKEGEEPQASAQDETP
ITSAKEESESTAVGQAHSDISKDMSEASEKTMTVEVEGSTVNDQQLEEVVLPSEEEGGGAGTKSVPEDDG
HALLAERIEKSLVEPKEDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPKQKEKEDAQEVELQEGK
VHSESDKAITPQAQEELQKQERESAKSELTES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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