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Report for CCDS5252.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5252.1 Public Homo sapiens 6 ZDHHC14 24 110 108 CCDS HistoryNCBI Gene:79683Re-query CCDS DB by CCDS ID:5252.1Re-query CCDS DB by GeneID:79683See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5252.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359775.10 ENSP00000352821.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359775.10Link to Ensembl Protein Viewer:ENSP00000352821.5Re-query CCDS DB by Nucleotide ID:ENST00000359775Re-query CCDS DB by Protein ID:ENSP00000352821
Original member Current member NCBI NM_024630.3 NP_078906.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024630.3Link to Protein Sequence:NP_078906.2Re-query CCDS DB by Nucleotide ID:NM_024630Re-query CCDS DB by Protein ID:NP_078906Link to BLAST:NP_078906.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078906.2 488 Q8IZN3-1 488 100% 0 0

Chromosomal Locations for CCDS 5252.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 157382022 157382266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 157542585 157542745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 157592988 157593146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 157628349 157628486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 157632834 157632882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 157645737 157645839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 157647259 157647368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 157653525 157653627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 157672724 157673122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1467 nt):
ATGCCTCCCGGCGGCGGCGGGCCCATGAAAGACTGCGAGTACAGCCAGATCAGCACCCACAGCTCCTCCC
CCATGGAGTCGCCCCACAAGAAGAAGAAAATCGCGGCCCGGAGGAAATGGGAGGTGTTCCCGGGAAGAAA
CAAGTTCTTCTGTAACGGGAGGATCATGATGGCCCGGCAGACGGGCGTCTTCTACCTGACGCTCGTCCTC
ATCCTGGTCACTAGCGGACTCTTCTTCGCCTTCGACTGTCCGTACCTGGCGGTGAAAATCACCCCTGCCA
TCCCTGCAGTCGCTGGCATCCTGTTCTTCTTTGTGATGGGGACCCTGCTCCGCACCAGCTTCAGCGACCC
CGGAGTCCTCCCACGAGCCACGCCTGATGAAGCCGCCGATCTGGAAAGGCAAATAGATATCGCAAACGGC
ACCAGTTCAGGGGGGTACCGCCCGCCTCCCAGAACCAAAGAAGTCATCATCAATGGCCAGACCGTGAAAC
TTAAATACTGTTTCACCTGCAAGATTTTCCGGCCCCCTCGCGCCTCCCATTGCAGCCTTTGTGATAACTG
CGTAGAACGGTTTGATCACCACTGTCCCTGGGTAGGCAACTGTGTGGGGAAAAGAAACTACAGATTTTTT
TATATGTTTATTTTATCTCTGTCTTTTCTGACAGTCTTTATATTTGCATTCGTTATCACCCACGTCATTC
TTCGTTCACAGCAAACAGGATTCCTAAATGCCCTTAAGGACAGTCCTGCAAGCGTCCTGGAGGCTGTGGT
GTGCTTCTTCTCTGTCTGGTCCATCGTTGGCCTCTCAGGATTCCACACCTACTTGATCAGCTCCAACCAG
ACAACAAATGAGGACATTAAAGGATCCTGGTCAAATAAAAGAGGTAAAGAAAATTACAATCCCTACAGCT
ACGGAAATATCTTTACCAACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAG
AGGGTACATCCAGCCCGACACGCCGCAGCCAGCAGCACCCTCCAATGGCATCACCATGTACGGGGCCACG
CAGTCACAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAG
CCACGCCCCTGCTGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGCACCTGCCCGGGAAGCCTGGCCT
GGGCACGCCCTGCGCCAGCCTCACACTGGGCCCGCCCACACCGCCCGCCTCCATGCCCAACCTCGCCGAG
GCCACGCTCGCGGACGTGATGCCCCGGAAAGATGAGCACATGGGCCACCAGTTCCTGACGCCCGATGAGG
CGCCCTCGCCCCCCAGGCTACTGGCGGCGGGCAGCCCCCTGGCGCACAGCCGCACCATGCACGTGCTGGG
CCTGGCCAGCCAGGACTCCCTGCATGAGGACTCTGTGCGCGGCCTGGTGAAGCTCAGCTCCGTGTGA

Translation (488 aa):
MPPGGGGPMKDCEYSQISTHSSSPMESPHKKKKIAARRKWEVFPGRNKFFCNGRIMMARQTGVFYLTLVL
ILVTSGLFFAFDCPYLAVKITPAIPAVAGILFFFVMGTLLRTSFSDPGVLPRATPDEAADLERQIDIANG
TSSGGYRPPPRTKEVIINGQTVKLKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCVGKRNYRFF
YMFILSLSFLTVFIFAFVITHVILRSQQTGFLNALKDSPASVLEAVVCFFSVWSIVGLSGFHTYLISSNQ
TTNEDIKGSWSNKRGKENYNPYSYGNIFTNCCVALCGPISPSLIDRRGYIQPDTPQPAAPSNGITMYGAT
QSQSDMCDQDQCIQSTKFVLQAAATPLLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASMPNLAE
ATLADVMPRKDEHMGHQFLTPDEAPSPPRLLAAGSPLAHSRTMHVLGLASQDSLHEDSVRGLVKLSSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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