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Report for CCDS5330.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5330.1 Public Homo sapiens 7 NUDT1 24 110 108 CCDS HistoryNCBI Gene:4521Re-query CCDS DB by CCDS ID:5330.1Re-query CCDS DB by GeneID:4521See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5330.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339737.6 ENSP00000343439.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339737.6Link to Ensembl Protein Viewer:ENSP00000343439.2Re-query CCDS DB by Nucleotide ID:ENST00000339737Re-query CCDS DB by Protein ID:ENSP00000343439
Original member Current member EBI ENST00000356714.6 ENSP00000349148.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356714.6Link to Ensembl Protein Viewer:ENSP00000349148.1Re-query CCDS DB by Nucleotide ID:ENST00000356714Re-query CCDS DB by Protein ID:ENSP00000349148
Original member Current member EBI ENST00000397046.5 ENSP00000380239.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397046.5Link to Ensembl Protein Viewer:ENSP00000380239.1Re-query CCDS DB by Nucleotide ID:ENST00000397046Re-query CCDS DB by Protein ID:ENSP00000380239
Original member Current member EBI ENST00000397049.2 ENSP00000380242.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397049.2Link to Ensembl Protein Viewer:ENSP00000380242.2Re-query CCDS DB by Nucleotide ID:ENST00000397049Re-query CCDS DB by Protein ID:ENSP00000380242
Original member Current member NCBI NM_001367553.1 NP_001354482.1 Accepted alive Link to Nucleotide Sequence:NM_001367553.1Link to Protein Sequence:NP_001354482.1Re-query CCDS DB by Nucleotide ID:NM_001367553Re-query CCDS DB by Protein ID:NP_001354482Link to BLAST:NP_001354482.1
Original member Current member NCBI NM_002452.4 NP_002443.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002452.4Link to Protein Sequence:NP_002443.3Re-query CCDS DB by Nucleotide ID:NM_002452Re-query CCDS DB by Protein ID:NP_002443Link to BLAST:NP_002443.3
Original member Current member NCBI NM_198948.2 NP_945186.1 Accepted alive Link to Nucleotide Sequence:NM_198948.2Link to Protein Sequence:NP_945186.1Re-query CCDS DB by Nucleotide ID:NM_198948Re-query CCDS DB by Protein ID:NP_945186Link to BLAST:NP_945186.1
Original member Current member NCBI NM_198950.2 NP_945188.1 Accepted alive Link to Nucleotide Sequence:NM_198950.2Link to Protein Sequence:NP_945188.1Re-query CCDS DB by Nucleotide ID:NM_198950Re-query CCDS DB by Protein ID:NP_945188Link to BLAST:NP_945188.1
Original member Current member NCBI NM_198953.1 NP_945191.1 Accepted alive Link to Nucleotide Sequence:NM_198953.1Link to Protein Sequence:NP_945191.1Re-query CCDS DB by Nucleotide ID:NM_198953Re-query CCDS DB by Protein ID:NP_945191Link to BLAST:NP_945191.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001354482.1 156 P36639-4 156 100% 0 0
NP_002443.3 156 P36639-4 156 100% 0 0
NP_945186.1 156 P36639-4 156 100% 0 0
NP_945188.1 156 P36639-4 156 100% 0 0
NP_945191.1 156 P36639-4 156 100% 0 0

Chromosomal Locations for CCDS 5330.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 2244575 2244726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2249857 2250002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2250829 2251001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGGGCGCCTCCAGGCTCTATACCCTGGTGCTGGTCCTGCAGCCTCAGCGAGTTCTCCTGGGCATGAAAA
AGCGAGGCTTCGGGGCCGGCCGGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCATCGAGGA
TGGGGCTAGGAGGGAGCTGCAGGAGGAGAGCGGTCTGACAGTGGACGCCCTGCACAAGGTGGGCCAGATC
GTGTTTGAGTTCGTGGGCGAGCCTGAGCTCATGGACGTGCATGTCTTCTGCACAGACAGCATCCAGGGGA
CCCCCGTGGAGAGCGACGAAATGCGCCCATGCTGGTTCCAGCTGGATCAGATCCCCTTCAAGGACATGTG
GCCCGACGACAGCTACTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCACGGGTACTTCAAGTTCCAG
GGTCAGGACACCATCCTGGACTACACACTCCGCGAGGTGGACACGGTCTAG

Translation (156 aa):
MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQI
VFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQ
GQDTILDYTLREVDTV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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