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Report for CCDS5387.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5387.1 Public Homo sapiens 7 NPY 24 110 108 CCDS HistoryNCBI Gene:4852Re-query CCDS DB by CCDS ID:5387.1Re-query CCDS DB by GeneID:4852See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5387.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000242152.7 ENSP00000242152.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000242152.7Link to Ensembl Protein Viewer:ENSP00000242152.2Re-query CCDS DB by Nucleotide ID:ENST00000242152Re-query CCDS DB by Protein ID:ENSP00000242152
Original member Current member EBI ENST00000407573.5 ENSP00000384364.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407573.5Link to Ensembl Protein Viewer:ENSP00000384364.1Re-query CCDS DB by Nucleotide ID:ENST00000407573Re-query CCDS DB by Protein ID:ENSP00000384364
Original member Current member EBI ENST00000405982.1 ENSP00000385282.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405982.1Link to Ensembl Protein Viewer:ENSP00000385282.1Re-query CCDS DB by Nucleotide ID:ENST00000405982Re-query CCDS DB by Protein ID:ENSP00000385282
Original member Current member NCBI NM_000905.4 NP_000896.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000905.4Link to Protein Sequence:NP_000896.1Re-query CCDS DB by Nucleotide ID:NM_000905Re-query CCDS DB by Protein ID:NP_000896Link to BLAST:NP_000896.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000896.1 97 P01303 97 100% 0 0

Chromosomal Locations for CCDS 5387.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24285241 24285428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24289499 24289579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24291663 24291687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (294 nt):
ATGCTAGGTAACAAGCGACTGGGGCTGTCCGGACTGACCCTCGCCCTGTCCCTGCTCGTGTGCCTGGGTG
CGCTGGCCGAGGCGTACCCCTCCAAGCCGGACAACCCGGGCGAGGACGCACCAGCGGAGGACATGGCCAG
ATACTACTCGGCGCTGCGACACTACATCAACCTCATCACCAGGCAGAGATATGGAAAACGATCCAGCCCA
GAGACACTGATTTCAGACCTCTTGATGAGAGAAAGCACAGAAAATGTTCCCAGAACTCGGCTTGAAGACC
CTGCAATGTGGTGA

Translation (97 aa):
MLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPGEDAPAEDMARYYSALRHYINLITRQRYGKRSSP
ETLISDLLMRESTENVPRTRLEDPAMW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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