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Report for CCDS53957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53957.1 Public Homo sapiens 15 NEO1 24 110 108 CCDS HistoryNCBI Gene:4756Re-query CCDS DB by CCDS ID:53957.1Re-query CCDS DB by GeneID:4756See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53957.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000560262.5 ENSP00000453317.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000560262.5Link to Ensembl Protein Viewer:ENSP00000453317.1Re-query CCDS DB by Nucleotide ID:ENST00000560262Re-query CCDS DB by Protein ID:ENSP00000453317
Original member NCBI NM_001172623.1 NP_001166094.1 Updated not alive Link to Nucleotide Sequence:NM_001172623.1Link to Protein Sequence:NP_001166094.1Re-query CCDS DB by Nucleotide ID:NM_001172623Re-query CCDS DB by Protein ID:NP_001166094
Current member NCBI NM_001172623.2 NP_001166094.1 Accepted alive Link to Nucleotide Sequence:NM_001172623.2Link to Protein Sequence:NP_001166094.1Re-query CCDS DB by Nucleotide ID:NM_001172623Re-query CCDS DB by Protein ID:NP_001166094Link to BLAST:NP_001166094.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166094.1 1408 Q92859-3 1408 100% 0 0

Chromosomal Locations for CCDS 53957.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 73052676 73052805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73116540 73116857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73122525 73122800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73126417 73126570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73135891 73136027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73176403 73176557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73178307 73178427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73236347 73236506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73244344 73244498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73249060 73249208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73249583 73249721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73253400 73253449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73254682 73254829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73258766 73258876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73260271 73260465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73266316 73266411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73270010 73270233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73270316 73270454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73272455 73272562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73273811 73274005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73274692 73274724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73278131 73278199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73282964 73283111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73288313 73288551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73289146 73289238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73298348 73298611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73301321 73301457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73302613 73302696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4227 nt):
ATGGCGGCGGAGCGGGGAGCCCGGCGACTCCTCAGCACCCCCTCCTTCTGGCTCTACTGCCTGCTGCTGC
TCGGGCGCCGGGCGCCGGGCGCCGCGGCCGCCAGGAGCGGCTCCGCGCCGCAGTCCCCAGGAGCCAGCAT
TCGAACGTTCACTCCATTTTATTTTCTGGTGGAGCCGGTGGATACACTCTCAGTTAGAGGCTCTTCTGTT
ATATTAAACTGTTCAGCATATTCTGAGCCTTCTCCAAAAATTGAATGGAAAAAAGATGGAACTTTTTTAA
ACTTAGTATCAGATGATCGACGCCAGCTTCTCCCGGATGGATCTTTATTTATCAGCAATGTGGTGCATTC
CAAACACAATAAACCTGATGAAGGTTATTATCAGTGTGTGGCCACTGTTGAGAGTCTTGGAACTATTATC
AGTAGAACAGCGAAGCTCATAGTAGCAGGTCTTCCAAGATTTACCAGCCAACCAGAACCTTCCTCAGTTT
ATGCTGGGAACAATGCAATTCTGAATTGTGAAGTTAATGCAGATTTGGTCCCATTTGTGAGGTGGGAACA
GAACAGACAACCCCTTCTTCTGGATGATAGAGTTATCAAACTTCCAAGTGGAATGCTGGTTATCAGCAAT
GCAACTGAAGGAGATGGCGGGCTTTATCGCTGCGTAGTGGAAAGTGGTGGGCCACCAAAGTATAGTGATG
AAGTTGAATTGAAGGTTCTTCCAGATCCTGAGGTGATATCAGACTTGGTATTTTTGAAACAGCCTTCTCC
CTTAGTCAGAGTCATTGGTCAGGATGTAGTGTTGCCATGTGTTGCTTCAGGACTTCCTACTCCAACCATT
AAATGGATGAAAAATGAGGAGGCACTTGACACAGAAAGCTCTGAAAGATTGGTATTGCTGGCAGGTGGTA
GCCTGGAGATCAGTGATGTTACTGAGGATGATGCTGGGACTTATTTTTGTATAGCTGATAATGGAAATGA
GACAATTGAAGCTCAAGCAGAGCTTACAGTGCAAGCTCAACCTGAATTCCTGAAGCAGCCTACTAATATA
TATGCTCACGAATCTATGGATATTGTATTTGAATGTGAAGTGACTGGAAAACCAACTCCAACTGTGAAGT
GGGTCAAAAATGGGGATATGGTTATCCCAAGTGATTATTTTAAGATTGTAAAGGAACATAATCTTCAAGT
TTTGGGTCTGGTGAAATCAGATGAAGGGTTCTATCAGTGCATTGCTGAAAATGATGTTGGAAATGCACAA
GCTGGAGCCCAACTGATAATCCTTGAACATGCACCAGCCACAACGGGACCACTGCCTTCAGCTCCTCGGG
ATGTCGTGGCCTCCCTGGTCTCTACCCGCTTCATCAAATTGACGTGGCGGACACCTGCATCAGATCCTCA
CGGAGACAACCTTACCTACTCTGTGTTCTACACCAAGGAAGGGATTGCTAGGGAACGTGTTGAGAATACC
AGTCACCCAGGAGAGATGCAAGTAACCATTCAAAACCTAATGCCAGCGACCGTGTACATCTTTAGAGTTA
TGGCTCAAAATAAGCATGGCTCAGGAGAGAGTTCAGCTCCACTGCGAGTAGAAACACAACCTGAGGTTCA
GCTCCCTGGCCCAGCACCTAACCTTCGTGCATATGCAGCTTCGCCTACCTCCATCACTGTTACGTGGGAA
ACACCAGTGTCTGGCAATGGGGAAATTCAGAATTATAAATTGTACTACATGGAAAAGGGGACTGATAAAG
AACAGGATGTTGATGTTTCAAGTCACTCTTACACCATTAATGGGTTGAAAAAATATACAGAGTATAGTTT
CCGAGTGGTGGCCTACAATAAACATGGTCCTGGAGTTTCCACACCAGATGTTGCTGTTCGAACATTGTCA
GATGTTCCCAGTGCTGCTCCTCAGAATCTGTCCTTGGAAGTGAGAAATTCAAAGAGTATTATGATTCACT
GGCAGCCACCTGCTCCAGCCACACAAAATGGGCAGATTACTGGCTACAAGATTCGCTACCGAAAGGCCTC
CCGAAAGAGTGATGTCACTGAGACCTTGGTAAGCGGGACACAGCTGTCTCAGCTGATTGAAGGTCTTGAT
CGGGGGACTGAGTATAATTTCCGAGTGGCTGCTCTAACAATCAATGGTACAGGCCCGGCAACTGACTGGC
TGTCTGCTGAAACTTTTGAAAGTGACCTAGATGAAACTCGTGTTCCTGAAGTGCCTAGCTCTCTTCACGT
ACGCCCGCTCGTTACTAGCATCGTAGTGAGCTGGACTCCTCCAGAGAATCAGAACATTGTGGTCAGAGGT
TACGCCATTGGTTATGGCATTGGCAGCCCTCATGCCCAGACCATCAAAGTGGACTATAAACAGCGCTATT
ACACCATTGAAAATCTGGATCCCAGCTCTCACTATGTGATTACCCTGAAAGCATTTAATAACGTGGGTGA
AGGCATCCCCCTGTATGAGAGTGCTGTGACCAGGCCTCACACAGACACTTCTGAAGTTGATTTATTTGTT
ATTAATGCTCCATACACTCCAGTGCCAGATCCCACTCCCATGATGCCACCAGTGGGAGTTCAGGCTTCCA
TTCTGAGTCATGACACCATCAGGATTACGTGGGCAGACAACTCGCTGCCCAAGCACCAGAAGATTACAGA
CTCCCGATACTACACCGTCCGATGGAAAACCAACATCCCAGCAAACACCAAGTACAAGAATGCAAATGCA
ACCACTTTGAGTTATTTGGTGACTGGTTTAAAGCCGAATACACTCTATGAATTCTCTGTGATGGTGACCA
AAGGTCGAAGATCAAGTACATGGAGTATGACAGCCCATGGGACCACCTTTGAATTAGTTCCGACTTCTCC
ACCCAAGGATGTGACTGTTGTGAGTAAAGAGGGGAAACCTAAGACCATAATTGTGAATTGGCAGCCTCCC
TCCGAAGCCAATGGCAAAATTACAGGTTACATCATATATTACAGTACAGATGTGAATGCAGAGATACATG
ACTGGGTTATTGAGCCTGTTGTGGGAAACAGACTGACTCACCAGATACAAGAGTTAACTCTTGACACACC
ATACTACTTCAAAATCCAGGCACGGAACTCAAAGGGCATGGGACCCATGTCTGAAGCTGTCCAATTCAGA
ACACCTAAAGCGGACTCCTCTGATAAAATGCCTAATGATCAAGCCTCAGGGTCTGGAGGGAAAGGAAGCC
GGCTGCCAGACCTAGGATCCGACTACAAACCTCCAATGAGCGGCAGTAACAGCCCTCATGGGAGCCCCAC
CTCTCCTCTGGACAGTAATATGCTGCTGGTCATAATTGTTTCTGTTGGCGTCATCACCATCGTGGTGGTT
GTGATTATCGCTGTCTTTTGTACCCGTCGTACCACCTCTCACCAGAAAAAGAAACGAGCTGCCTGCAAAT
CAGTGAATGGCTCTCATAAGTACAAAGGGAATTCCAAAGATGTGAAACCTCCAGATCTCTGGATCCATCA
TGAGAGACTGGAGCTGAAACCCATTGATAAGTCTCCAGACCCAAACCCCATCATGACTGATACTCCAATT
CCTCGCAACTCTCAAGATATCACACCAGTTGACAACTCCATGGACAGCAATATCCATCAAAGGCGAAATT
CATACAGAGGGCATGAGTCAGAGGACAGCATGTCTACACTGGCTGGAAGGCGAGGAATGAGACCAAAAAT
GATGATGCCCTTTGACTCCCAGCCACCCCAGCAATCCGTTCGAAATACCCCCAGCACTGACACCATGCCA
GCCTCTTCGTCTCAAACATGCTGCACTGATCACCAGGACCCTGAAGGTGCTACCAGCTCCTCTTACTTGG
CCAGCTCCCAAGAGGAAGATTCAGGCCAGAGTCTTCCCACTGCCCATGTTCGCCCTTCCCACCCATTGAA
GAGCTTCGCCGTGCCAGCAATCCCGCCTCCAGGACCTCCCACCTATGATCCTGCATTGCCAAGCACACCA
TTACTGTCCCAGCAAGCTCTGAACCATCACATTCACTCAGTGAAGACAGCCTCCATCGGGACTCTAGGAA
GGAGCCGGCCTCCTATGCCAGTGGTTGTTCCCAGTGCCCCTGAAGTGCAGGAGACCACAAGGATGTTGGA
AGACTCCGAGAGTAGCTATGAACCAGATGAGCTGACCAAAGAGATGGCCCACCTGGAAGGACTAATGAAG
GACCTAAACGCTATCACAACAGCATGA

Translation (1408 aa):
MAAERGARRLLSTPSFWLYCLLLLGRRAPGAAAARSGSAPQSPGASIRTFTPFYFLVEPVDTLSVRGSSV
ILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKHNKPDEGYYQCVATVESLGTII
SRTAKLIVAGLPRFTSQPEPSSVYAGNNAILNCEVNADLVPFVRWEQNRQPLLLDDRVIKLPSGMLVISN
ATEGDGGLYRCVVESGGPPKYSDEVELKVLPDPEVISDLVFLKQPSPLVRVIGQDVVLPCVASGLPTPTI
KWMKNEEALDTESSERLVLLAGGSLEISDVTEDDAGTYFCIADNGNETIEAQAELTVQAQPEFLKQPTNI
YAHESMDIVFECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQ
AGAQLIILEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT
SHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPEVQLPGPAPNLRAYAASPTSITVTWE
TPVSGNGEIQNYKLYYMEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLS
DVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLD
RGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRG
YAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTDTSEVDLFV
INAPYTPVPDPTPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANA
TTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPP
SEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFR
TPKADSSDKMPNDQASGSGGKGSRLPDLGSDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVVV
VIIAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPI
PRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQQSVRNTPSTDTMP
ASSSQTCCTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPPGPPTYDPALPSTP
LLSQQALNHHIHSVKTASIGTLGRSRPPMPVVVPSAPEVQETTRMLEDSESSYEPDELTKEMAHLEGLMK
DLNAITTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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