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Report for CCDS54003.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54003.1 Public Homo sapiens 16 ZNF668 24 110 108 CCDS HistoryNCBI Gene:79759Re-query CCDS DB by CCDS ID:54003.1Re-query CCDS DB by GeneID:79759See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54003.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000426488.6 ENSP00000403975.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426488.6Link to Ensembl Protein Viewer:ENSP00000403975.2Re-query CCDS DB by Nucleotide ID:ENST00000426488Re-query CCDS DB by Protein ID:ENSP00000403975
Original member Current member EBI ENST00000539836.3 ENSP00000442573.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539836.3Link to Ensembl Protein Viewer:ENSP00000442573.3Re-query CCDS DB by Nucleotide ID:ENST00000539836Re-query CCDS DB by Protein ID:ENSP00000442573
Original member Current member NCBI NM_001172669.2 NP_001166140.1 Accepted alive Link to Nucleotide Sequence:NM_001172669.2Link to Protein Sequence:NP_001166140.1Re-query CCDS DB by Nucleotide ID:NM_001172669Re-query CCDS DB by Protein ID:NP_001166140Link to BLAST:NP_001166140.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166140.1 642 Q96K58-2 642 100% 0 0

Chromosomal Locations for CCDS 54003.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 31061068 31062280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31063813 31064481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31064572 31064618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1929 nt):
ATGTCAGAGCCAGGAATGCTGGGCAGGAAGGATGTGTGGGTTCCGAGAGAAACCCCGTTCACCAAGGCCA
TGGAAGTGGAGGCTGCAGAGGCCCGGTCCCCAGCCCCCGGCTACAAGCGCTCGGGCCGCCGCTACAAGTG
CCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCA
GACTGCTCTGAAGAGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAAGCTAAGGCAGAGGAAGCCAGTG
GGGAGAAGGTGTCAGGCTCCGCGGCCAAGCCTAGGCCCTATGCGTGTCCGCTATGCCCCAAGGCCTACAA
GACGGCACCCGAGCTGCGCAGCCACGGGCGCAGCCACACGGGGGAGAAGCCCTTTCCGTGCCCCGAGTGC
GGCCGCCGCTTCATGCAGCCCGTGTGCCTGCGCGTGCACCTGGCCTCGCACGCTGGCGAACTGCCCTTCC
GCTGTGCGCACTGCCCGAAGGCCTATGGCGCGCTCTCCAAGCTCAAGATCCACCAGCGTGGCCACACAGG
CGAGCGGCCTTACGCCTGCGCCGACTGCGGCAAGAGCTTTGCTGACCCTTCAGTGTTCCGCAAGCACCGG
CGTACTCACGCTGGCCTGCGGCCCTACAGCTGTGAGCGTTGCGGCAAAGCCTATGCGGAGCTCAAGGACC
TCCGCAACCATGAGCGGTCCCACACCGGCGAGCGCCCCTTCCTCTGCTCCGAGTGCGGGAAGAGCTTCTC
CCGCTCATCCTCGCTCACGTGCCACCAGCGCATCCACGCGGCACAGAAGCCCTACCGCTGCCCGGCCTGC
GGCAAGGGCTTCACGCAGCTCAGTTCCTACCAGAGCCACGAGCGCACGCACTCGGGGGAGAAGCCCTTCC
TGTGCCCGCGCTGCGGCCGCATGTTCTCCGACCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAGG
GGTGAAGCCATACCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGCCGGCGGACCTGGCCATGCACCGG
CGTGTGCACACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTTCGTGGCGTCCTGGGACC
TCAAGCGGCACGCGCTGGTGCACTCTGGCCAGCGGCCCTTCCGCTGTGAGGAGTGCGGGCGAGCCTTCGC
CGAGCGTGCCAGCCTCACGAAGCATAGCCGGGTGCACTCGGGGGAGCGCCCCTTCCACTGTAACGCATGT
GGGAAATCCTTTGTGGTGTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGCCGCGG
GTGTGCCCCCTGCACAGGAGCTGGTGGTGGGGTTGGCGCTGCCTGTGGGCGTGGCAGGTGAGAGTTCAGC
CGCCCCGGCAGCAGGGGCGGGGCTGGGGGACCCTCCAGCAGGGCTGCTAGGGCTGCCCCCGGAGTCAGGT
GGTGTGATGGCCACACAGTGGCAGGTGGTGGGCATGACGGTGGAGCATGTGGAATGCCAAGATGCTGGTG
TCCGGGAGGCTCCTGGTCCCTTGGAAGGGGCAGGCGAGGCGGGGGGTGAGGAGGCTGACGAGAAGCCCCC
CCAGTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCACAATGACGCTGCTGCGTCGGCACGAGCGCTCA
CACCCGGAGCTCCGGCCCTTCCCCTGCACCCAGTGCGGCAAGAGCTTCTCTGACCGGGCTGGGCTGCGCA
AACACAGCCGCACTCACAGCTCAGTGCGCCCCTACACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTGC
CAGCGACTTGCGCAAGCATGAACGCACCCACCCTGTGCCCATGGGGACCCCCACACCCCTGGAGCCCCTG
GTGGCTTTGCTAGGAATGCCTGAAGAGGGGCCGGCCTGA

Translation (642 aa):
MSEPGMLGRKDVWVPRETPFTKAMEVEAAEARSPAPGYKRSGRRYKCLSCTKTFPNAPRAARHAATHGPA
DCSEEVAEVKPKPETEAKAEEASGEKVSGSAAKPRPYACPLCPKAYKTAPELRSHGRSHTGEKPFPCPEC
GRRFMQPVCLRVHLASHAGELPFRCAHCPKAYGALSKLKIHQRGHTGERPYACADCGKSFADPSVFRKHR
RTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPFLCSECGKSFSRSSSLTCHQRIHAAQKPYRCPAC
GKGFTQLSSYQSHERTHSGEKPFLCPRCGRMFSDPSSFRRHQRAHEGVKPYHCEKCGKDFRQPADLAMHR
RVHTGDRPFKCLQCDKTFVASWDLKRHALVHSGQRPFRCEECGRAFAERASLTKHSRVHSGERPFHCNAC
GKSFVVSSSLRKHERTHRSSEAAGVPPAQELVVGLALPVGVAGESSAAPAAGAGLGDPPAGLLGLPPESG
GVMATQWQVVGMTVEHVECQDAGVREAPGPLEGAGEAGGEEADEKPPQFVCRECKETFSTMTLLRRHERS
HPELRPFPCTQCGKSFSDRAGLRKHSRTHSSVRPYTCPHCPKAFLSASDLRKHERTHPVPMGTPTPLEPL
VALLGMPEEGPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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