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Report for CCDS54230.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54230.1 Public Homo sapiens 19 TMEM221 24 110 108 CCDS HistoryNCBI Gene:100130519Re-query CCDS DB by CCDS ID:54230.1Re-query CCDS DB by GeneID:100130519See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54230.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341130.6 ENSP00000342162.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341130.6Link to Ensembl Protein Viewer:ENSP00000342162.5Re-query CCDS DB by Nucleotide ID:ENST00000341130Re-query CCDS DB by Protein ID:ENSP00000342162
Original member Current member NCBI NM_001190844.2 NP_001177773.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001190844.2Link to Protein Sequence:NP_001177773.1Re-query CCDS DB by Nucleotide ID:NM_001190844Re-query CCDS DB by Protein ID:NP_001177773Link to BLAST:NP_001177773.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177773.1 291 A6NGB7 291 100% 0 0

Chromosomal Locations for CCDS 54230.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17436458 17436927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17445199 17445284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17448143 17448462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGGCCCGTTCTTACGGCGGCCGGGTGCTGGCTGCAATGACCCTGCTGGGCATCGCGGCGGCCGTGCTGG
CGGCGCTGGGCGCGCAGCTGCTGTTTCAGCTGCAGGCGGGCCGCGCCGAGCTGCGGGGGCTGCGCGCCGA
GGGGCTGGGCCAGGAGCTGGGCGCCGGCCCCGGGCTGCCAGAGGACGCGGCCGGGACGCTGCTGCCGCTG
GCCGCCGCGCTGGCCGCGCTGGTGCTCGTGCTGGGGTTCACCTGCTTGCTGCTCGCCGCGCTCTGTGGCC
ACCTGGGCGCCGAGCTGGCGCGGGGGCCTGGCCCCAGGAGGTCTGACTGGTTTCTCTACGACTGCCGCCT
CCTCAGACATGTGGCCCTTGGCCTTTTCTGCTGTGGGATCTCCGTCTATTTAGCAGCACTGTCCATCTAT
GCCTTGCTACTTTTCGAGATCGAGACAGGCGCAGCAGCTGCTTCCATCCTCGGCTCGGGCACCCTGGTTC
TGGTGGCTGTGCTGACCCACACTCTCCTCCGGGCTGCCCGGGCTGCCCGCCGTGGGCTCCATGAGTTGTC
CCCGCCATCCTTTGAAGACGACCTCGCCCGCCCTGCCGAAGTCTCCAAGGCCAGCCCCAGAGCTCAGCCT
CAGCAGGGTATCCATCGTCGGACCCCCTATTCAACCTGTCCAGAGCCTGGGGACCCCTTTGGGTCCATGG
CCACTGCCACAGCACCTGCAGCCCTGGAGGGAGGCTGGGAGAGCAGCCTGCCTGCATCCAGAATGCACCG
GACACTGTCGGCTGGCCTGGGGCACTGGGACGGGGTTACGCACGAGATGCGTCGAATGCTGGGCCACAGA
CCAGGGAGCATGGGGAAGGACTCCACACTGGTGTGA

Translation (291 aa):
MARSYGGRVLAAMTLLGIAAAVLAALGAQLLFQLQAGRAELRGLRAEGLGQELGAGPGLPEDAAGTLLPL
AAALAALVLVLGFTCLLLAALCGHLGAELARGPGPRRSDWFLYDCRLLRHVALGLFCCGISVYLAALSIY
ALLLFEIETGAAAASILGSGTLVLVAVLTHTLLRAARAARRGLHELSPPSFEDDLARPAEVSKASPRAQP
QQGIHRRTPYSTCPEPGDPFGSMATATAPAALEGGWESSLPASRMHRTLSAGLGHWDGVTHEMRRMLGHR
PGSMGKDSTLV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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