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Report for CCDS54629.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54629.1 Public Homo sapiens 3 GPR156 24 110 108 CCDS HistoryNCBI Gene:165829Re-query CCDS DB by CCDS ID:54629.1Re-query CCDS DB by GeneID:165829See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54629.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000461057.1 ENSP00000418758.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000461057.1Link to Ensembl Protein Viewer:ENSP00000418758.1Re-query CCDS DB by Nucleotide ID:ENST00000461057Re-query CCDS DB by Protein ID:ENSP00000418758
Original member Current member NCBI NM_001168271.2 NP_001161743.1 Accepted alive Link to Nucleotide Sequence:NM_001168271.2Link to Protein Sequence:NP_001161743.1Re-query CCDS DB by Nucleotide ID:NM_001168271Re-query CCDS DB by Protein ID:NP_001161743Link to BLAST:NP_001161743.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161743.1 810 Q8NFN8-2 810 100% 0 0

Chromosomal Locations for CCDS 54629.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 120167032 120168384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120173312 120173470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120181125 120181361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120185299 120185394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120186670 120186783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120192939 120193049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120193295 120193424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120243640 120243776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 120244003 120244098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2433 nt):
ATGGAGCCTGAAATAAACTGCTCTGAATTGTGTGACAGTTTTCCTGGCCAGGAGCTGGATCGGAGACCCC
TTCATGATCTCTGCAAGACAACAATTACATCTTCCCACCACAGCAGTAAGACCATCTCTTCATTATCTCC
TGTCCTCTTGGGTATTGTTTGGACTTTTCTCAGCTGTGGACTTCTGCTGATACTTTTCTTTCTTGCCTTT
ACAATTCACTGCAGGAAGAACAGGATTGTGAAGATGTCCAGTCCCAATCTGAACATTGTGACCTTACTGG
GCAGTTGTCTCACTTACAGTAGCGCTTACCTCTTTGGGATTCAGGATGTTTTAGTGGGGAGCTCAATGGA
AACTCTCATTCAGACAAGACTGTCCATGCTGTGCATTGGGACCTCCCTTGTGTTTGGCCCCATTCTGGGA
AAGAGCTGGCGACTCTACAAGGTGTTTACCCAAAGGGTCCCGGACAAGAGAGTGATTATCAAAGACCTGC
AGTTGCTGGGGTTGGTGGCAGCCCTGTTGATGGCTGATGTGATCCTGCTCATGACGTGGGTGCTGACTGA
TCCCATCCAGTGCCTCCAGATTCTCAGTGTGACAGGGAAAGACGTGTCCTGCACTTCGACCAGCACCCAC
TTCTGTGCTTCCCGGTATTCCGATGTTTGGATTGCTCTCATTTGGGGATGCAAGGGTCTGCTCCTGCTGT
ATGGTGCCTACCTGGCTGGCCTGACTGGCCATGTCAGCTCCCCTCCTGTGAATCAGTCCTTAACCATCAT
GGTGGGGGTCAACCTCCTTGTACTGGCTGCTGGGCTGCTTTTTGTAGTCACCAGATACTTGCATTCCTGG
CCCAACCTGGTCTTTGGACTCACATCTGGAGGGATCTTTGTTTGTACAACTACAATCAACTGCTTCATCT
TCATTCCCCAGCTGAAGCAATGGAAGGCATTTGAAGAGGAAAACCAAACAATCAGACGCATGGCCAAATA
TTTCAGCACTCCCAACAAAAGCTTCCATACCCAGTATGGTGAGGAGGAGAACTGCCACCCGAGGGGAGAG
AAAAGCTCCATGGAGAGGCTCCTCACAGAAAAAAATGCTGTGATTGAAAGCCTGCAGGAACAAGTAAACA
ACGCCAAAGAGAAGATTGTGAGGCTGATGTCAGCTGAGTGCACCTATGACCTCCCAGAGGGGGCTGCCCC
ACCTGCCTCTTCCCCGAACAAGGACGTCCAGGCGGTAGCCTCGGTCCACACCCTGGCAGCTGCTCAGGGG
CCTTCGGGTCACCTCTCTGACTTTCAGAATGATCCTGGCATGGCTGCCCGGGATTCCCAGTGCACTTCAG
GGCCCTCCTCATATGCACAAAGCCTTGAGGGGCCTGGGAAGGACTCCAGCTTCTCCCCAGGGAAGGAGGA
GAAGATATCTGACTCAAAAGACTTTTCTGATCATTTAGACTCAGGTTGTAGCCAGAAGCCATGGACTGAG
CAAAGCCTGGGTCCAGAAAGAGGAGACCAAGTCCCCATGAACCCCAGCCAGAGTCTCCTACCAGAAAGAG
GCGGCTCAGATCCCCAGAGACAGAGGCATCTGGAGAACTCAGAGGAGCCCCCAGAGCGGCGGTCACGGGT
TAGTTCAGTAATCAGGGAGAAACTTCAGGAGGTCTTACAAGATCTGGGCCTGGGCCCTGAGGCTTCCCTC
TCCACCGCCCCCTCTTGTCATCAGCAAACCTGGAAGAACAGTGCTGCCTTCAGCCCCCAAAAGATGCCCC
TCTCCAAGGAGCTCGGCTTTAGCCCTTACATGGTGAGGAGAAGGCGGGCAGCTCAGCGGGCCCGCTCACA
CTTTCCTGGCTCTGCACCCTCATCTGTGGGGCATCGGGCAAACAGGACTGTTCCTGGGGCACACAGCAGG
CTACATGTGCAGAATGGGGACAGCCCCAGCCTGGCCCCACAAACTACTGATTCCAGAGTACGAAGACCTT
CTTCCAGGAAGCCTTCACTACCTTCAGATCCTCAAGACAGACCAGGTACCCTGGAGGGCAGCAAACAAAG
CCAGACAGAGCCCGAGGGGGCTAGAGGGAGCAAAGCAGCCTTTCTTCGCCAGCCTTCTGGTTCTGGCCGG
GCCCCAAGTCCTGCTGCCCCATGCCTCTCCAAAGCCTCACCTGACTTGCCTGAACAGTGGCAGCTGTGGC
CCCCAGTGCCCTCAGGCTGTGCCTCCCTGTCTTCTCAACACAGCTATTTTGATACTGAGTCCAGCAGCTC
AGATGAGTTCTTCTGCCGCTGCCACCGGCCCTACTGTGAAATCTGCTTCCAGAGCTCTTCTGACTCTAGT
GACAGTGGCACATCAGACACTGACCCTGAGCCTACTGGGGGGCTGGCTTCCTGGGAAAAGCTGTGGGCCC
GCTCCAAGCCTATTGTGAACTTCAAAGATGACTTGAAACCCACGCTGGTGTGA

Translation (810 aa):
MEPEINCSELCDSFPGQELDRRPLHDLCKTTITSSHHSSKTISSLSPVLLGIVWTFLSCGLLLILFFLAF
TIHCRKNRIVKMSSPNLNIVTLLGSCLTYSSAYLFGIQDVLVGSSMETLIQTRLSMLCIGTSLVFGPILG
KSWRLYKVFTQRVPDKRVIIKDLQLLGLVAALLMADVILLMTWVLTDPIQCLQILSVTGKDVSCTSTSTH
FCASRYSDVWIALIWGCKGLLLLYGAYLAGLTGHVSSPPVNQSLTIMVGVNLLVLAAGLLFVVTRYLHSW
PNLVFGLTSGGIFVCTTTINCFIFIPQLKQWKAFEEENQTIRRMAKYFSTPNKSFHTQYGEEENCHPRGE
KSSMERLLTEKNAVIESLQEQVNNAKEKIVRLMSAECTYDLPEGAAPPASSPNKDVQAVASVHTLAAAQG
PSGHLSDFQNDPGMAARDSQCTSGPSSYAQSLEGPGKDSSFSPGKEEKISDSKDFSDHLDSGCSQKPWTE
QSLGPERGDQVPMNPSQSLLPERGGSDPQRQRHLENSEEPPERRSRVSSVIREKLQEVLQDLGLGPEASL
STAPSCHQQTWKNSAAFSPQKMPLSKELGFSPYMVRRRRAAQRARSHFPGSAPSSVGHRANRTVPGAHSR
LHVQNGDSPSLAPQTTDSRVRRPSSRKPSLPSDPQDRPGTLEGSKQSQTEPEGARGSKAAFLRQPSGSGR
APSPAAPCLSKASPDLPEQWQLWPPVPSGCASLSSQHSYFDTESSSSDEFFCRCHRPYCEICFQSSSDSS
DSGTSDTDPEPTGGLASWEKLWARSKPIVNFKDDLKPTLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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