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Report for CCDS5549.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5549.1 Public Homo sapiens 7 BAZ1B 24 110 108 CCDS HistoryNCBI Gene:9031Re-query CCDS DB by CCDS ID:5549.1Re-query CCDS DB by GeneID:9031See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5549.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339594.9 ENSP00000342434.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000339594.9Link to Ensembl Protein Viewer:ENSP00000342434.4Re-query CCDS DB by Nucleotide ID:ENST00000339594Re-query CCDS DB by Protein ID:ENSP00000342434
Original member Current member EBI ENST00000404251.1 ENSP00000385442.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000404251.1Link to Ensembl Protein Viewer:ENSP00000385442.1Re-query CCDS DB by Nucleotide ID:ENST00000404251Re-query CCDS DB by Protein ID:ENSP00000385442
Original member Current member NCBI NM_001370402.1 NP_001357331.1 Accepted alive Link to Nucleotide Sequence:NM_001370402.1Link to Protein Sequence:NP_001357331.1Re-query CCDS DB by Nucleotide ID:NM_001370402Re-query CCDS DB by Protein ID:NP_001357331Link to BLAST:NP_001357331.1
Original member Current member NCBI NM_032408.4 NP_115784.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032408.4Link to Protein Sequence:NP_115784.1Re-query CCDS DB by Nucleotide ID:NM_032408Re-query CCDS DB by Protein ID:NP_115784Link to BLAST:NP_115784.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357331.1 1483 Q9UIG0-1 1483 100% 0 0
NP_115784.1 1483 Q9UIG0-1 1483 100% 0 0

Chromosomal Locations for CCDS 5549.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 73442196 73442553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73442725 73442828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73443984 73444129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73447264 73447379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73449542 73449689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73450847 73450994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73459536 73459718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73462922 73463099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73465439 73465537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73466296 73466401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73469517 73469650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73470345 73470483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73476868 73478569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73489194 73489391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73492800 73492921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73498497 73498698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73508327 73508471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73510736 73510852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73521827 73521933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4452 nt):
ATGGCGCCGCTCCTGGGCCGCAAGCCCTTCCCGCTGGTGAAGCCGTTGCCCGGAGAGGAGCCGCTCTTCA
CC
ATCCCGCACACTCAGGAGGCCTTCCGCACCCGGGAAGAGTATGAAGCCCGCTTGGAAAGGTACAGTGA
G
CGCATTTGGACGTGCAAGAGTACTGGAAGCAGTCAGCTAACACACAAGGAAGCCTGGGAGGAAGAACAG
GAA
GTTGCTGAGCTTTTGAAGGAGGAGTTTCCTGCCTGGTATGAGAAGCTTGTTCTGGAAATGGTTCACC
AT
AACACAGCCTCCTTAGAGAAGTTAGTAGATACTGCTTGGTTGGAGATCATGACCAAATATGCTGTGGG
A
GAAGAGTGTGACTTCGAGGTTGGGAAGGAGAAAATGCTCAAGGTGAAGATTGTGAAGATTCATCCTTTG
GAG
AAAGTGGATGAAGAGGCCACTGAGAAGAAATCTGATGGTGCCTGTGATTCTCCATCAAGTGACAAAG
AG
AACTCCAGTCAGATTGCTCAGGACCATCAGAAGAAGGAGACAGTTGTGAAAGAGGATGAAGGAAGGAG
A
GAGAGTATTAATGACAGAGCACGTAGATCGCCACGAAAACTTCCTACTTCATTAAAAAAAGGAGAAAGG
AAA
TGGGCTCCTCCAAAATTTCTGCCTCACAAATATGATGTGAAACTACAAAATGAAGATAAGATCATCA
GT
AACGTGCCAGCAGACAGCTTGATTCGTACAGAGCGCCCACCAAATAAGGAGATAGTTCGATACTTTAT
A
CGGCATAATGCATTACGAGCTGGTACTGGTGAAAATGCACCTTGGGTCGTAGAAGATGAATTGGTGAAG
AAA
TACTCTCTGCCCAGCAAGTTCAGTGACTTTTTACTTGATCCATACAAGTATATGACTCTCAACCCTT
CT
ACTAAGAGGAAGAATACTGGATCCCCAGACAGGAAGCCCTCAAAGAAATCCAAGACAGACAACTCTTC
T
CTTAGTTCACCACTAAATCCTAAGTTATGGTGTCACGTACACTTGAAGAAGTCATTGAGTGGCTCGCCA
CTC
AAAGTGAAGAACTCAAAGAATTCCAAATCTCCTGAAGAACATCTAGAAGAAATGATGAAGATGATGT
CG
CCCAATAAGCTGCACACTAACTTTCACATTCCTAAAAAAGGCCCACCTGCCAAGAAACCAGGGAAGCA
C
AGTGACAAGCCTTTGAAGGCAAAGGGCAGAAGCAAAGGCATCCTGAATGGACAGAAATCCACAGGGAAT
TCC
AAATCTCCCAAAAAAGGACTGAAGACTCCTAAAACCAAAATGAAGCAGATGACTTTGTTGGATATGG
CC
AAAGGCACGCAGAAGATGACACGAGCCCCACGGAATTCTGGGGGTACACCTAGGACCTCTAGTAAACC
T
CATAAACATCTGCCTCCTGCAGCCCTACACCTCATTGCATACTACAAAGAAAACAAAGACAGGGAGGAC
AAG
AGGAGCGCCCTGTCCTGTGTTATCTCCAAAACAGCTCGTCTTCTCTCTAGTGAAGATAGAGCTCGTC
TC
CCAGAAGAATTGCGAAGTCTTGTTCAAAAACGCTATGAACTTCTAGAGCACAAAAAGAGGTGGGCTTC
T
ATGTCTGAAGAACAACGGAAAGAATATTTGAAAAAGAAACGGGAGGAGCTGAAAAAGAAGTTGAAGGAA
AAA
GCCAAAGAACGAAGAGAGAAAGAAATGCTTGAGAGATTAGAAAAACAGAAGCGGTATGAGGACCAAG
AG
TTAACTGGCAAAAACCTTCCAGCATTCAGATTGGTGGATACCCCTGAAGGGCTGCCCAACACGCTGTT
T
GGGGATGTGGCCATGGTGGTGGAATTCTTGAGCTGTTATTCTGGGCTACTTTTACCAGATGCTCAGTAT
CCT
ATTACTGCTGTGTCCCTTATGGAAGCCTTGAGTGCAGATAAGGGTGGCTTTTTATACCTTAACAGGG
TG
TTGGTCATCCTCTTACAGACCCTCCTACAAGATGAGATAGCAGAAGACTATGGTGAATTGGGAATGAA
G
CTGTCGGAAATCCCCTTGACTCTGCATTCTGTTTCAGAGCTGGTGCGGCTCTGCTTGCGCAGATCTGAT
GTT
CAGGAGGAAAGCGAGGGCTCAGACACAGATGACAATAAAGATTCAGCTGCATTTGAGGATAATGAGG
TA
CAAGATGAGTTCCTAGAAAAGCTGGAGACCTCTGAATTTTTTGAGCTGACGTCAGAGGAGAAGCTACA
G
ATCTTGACAGCACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACATGGAGACCAGACAG
CAG
ATGTCTGCAGAGTTGTGGAAGGAACGGCTTGCTGTGTTGAAGGAAGAAAATGATAAGAAGAGAGCAG
AG
AAACAGAAACGGAAAGAAATGGAAGCCAAAAATAAAGAAAATGGAAAAGTTGAGAATGGGTTAGGCAA
A
ACTGATAGGAAAAAAGAAATTGTGAAGTTTGAGCCCCAAGTAGATACAGAAGCTGAAGACATGATTAGT
GCT
GTGAAGAGCAGAAGGTTGCTTGCCATTCAAGCTAAGAAGGAACGGGAAATCCAGGAAAGAGAAATGA
AA
GTGAAACTGGAACGCCAAGCTGAAGAAGAACGAATACGGAAGCACAAAGCAGCTGCTGAGAAAGCTTT
C
CAGGAAGGGATTGCCAAGGCCAAACTAGTCATGCGCAGGACTCCTATTGGCACAGATCGAAACCATAAT
AG
A
TACTGGCTCTTCTCAGATGAAGTTCCAGGATTATTCATTGAAAAAGGCTGGGTACATGACAGCATTG
AC
TACCGATTCAACCATCACTGCAAAGACCACACAGTCTCTGGTGATGAGGATTACTGTCCTCGCAGTAA
G
AAAGCAAACTTAGGTAAAAATGCAAGCATGAACACACAACATGGAACAGCAACAGAAGTTGCTGTAGAG
ACA
ACCACACCCAAACAAGGACAGAACCTATGGTTTTTATGTGATAGTCAAAAGGAGCTGGATGAGTTGC
TA
AACTGTCTTCACCCTCAGGGAATAAGAGAAAGTCAACTTAAAGAGAGACTAGAGAAGAGGTACCAGGA
C
ATTATTCACTCTATTCATCTAGCACGGAAGCCAAATTTGGGTCTAAAATCTTGTGATGGCAACCAGGAG
CTT
TTAAACTTCCTTCGTAGTGATCTCATTGAAGTTGCAACAAGGTTACAAAAAGGAGGACTTGGATATG
TG
GAAGAAACATCAGAATTTGAAGCCCGGGTCATTTCATTAGAGAAATTGAAGGATTTTGGTGAGTGTGT
G
ATTGCCCTTCAGGCCAGTGTCATAAAGAAATTTCTCCAAGGCTTCATGGCTCCCAAGCAAAAGAGAAGA
AAA
CTCCAAAGTGAAGATTCAGCAAAAACTGAGGAAGTGGATGAAGAGAAGAAAATGGTAGAGGAAGCAA
AG
GTTGCATCTGCACTGGAGAAATGGAAGACAGCAATCCGGGAAGCTCAGACTTTCTCCAGGATGCACGT
G
CTGCTTGGGATGCTTGATGCCTGTATCAAGTGGGATATGTCCGCAGAAAATGCTAGGTGCAAAGTTTGT
CGA
AAGAAAGGTGAGGATGACAAATTGATCTTGTGTGATGAGTGTAATAAAGCCTTCCACCTGTTTTGTC
TG
AGGCCGGCCCTCTATGAAGTACCAGATGGTGAGTGGCAGTGCCCAGCTTGCCAGCCCGCTACTGCCAG
G
CGCAACTCCCGTGGCAGGAACTATACTGAAGAGTCTGCTTCTGAGGACAGTGAAGATGATGAGAGTGAT
GAA
GAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAAGAAGATTATGAGGTGGCTGGTTTGCGATTGAGAC
CT
CGAAAGACCATCCGGGGCAAGCACAGCGTCATCCCCCCTGCAGCAAGGTCAGGCCGGCGCCCGGGTAA
G
AAGCCACACTCTACCAGGAGGTCTCAGCCCAAGGCACCACCTGTGGATGATGCTGAGGTGGATGAGCTG
GTG
CTTCAGACCAAGCGGAGCTCCCGGAGGCAAAGCCTGGAGCTGCAGAAGTGTGAAGAGATCCTCCACA
AG
ATCGTGAAGTACCGCTTCAGCTGGCCCTTCAGGGAGCCTGTGACCAGAGATGAGGCCGAGGACTACTA
T
GATGTGATCACGCACCCCATGGACTTTCAGACAGTGCAGAACAAATGTTCCTGTGGGAGCTACCGCTCT
GTG
CAGGAGTTTCTTACTGACATGAAGCAAGTGTTTACCAATGCTGAGGTTTACAACTGCCGTGGCAGCC
AT
GTGCTAAGCTGCATGGTGAAGACAGAACAGTGTCTAGTGGCTCTGTTGCATAAACACCTTCCTGGCCA
C
CCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAGGCTTGCTGAAGATGAAGGGGACAGTGAGCCA
GAG
GCCGTTGGACAGTCCAGGGGACGAAGACAGAAGAAGTAG


Translation (1483 aa):
MAPLLGRKPFPLVKPLPGEEPLFTIPHTQEAFRTREEYEARLERYSERIWTCKSTGSSQLTHKEAWEEEQ
E
VAE
LLKEEFPAWYEKLVLEMVHHNTASLEKLVDTAWLEIMTKYAVGEECDFEVGKEKMLKVKIVKIHPL
E
KVDEEATEKKSDGACDSPSSDKENSSQIAQDHQKKETVVKEDEGRRESI
NDRARRSPRKLPTSLKKGER
K
WAPPKFLPHKYDVKLQNEDK
IISNVPADSLIRTERPPNKEIVRYFIRHNALRAGTGENAPWVVEDELVK
K
YSLPSKFSDFLLDPYK
YMTLNPSTKRKNTGSPDRKPSKKSKTDNSSLSSPLNPKLWCHVHLKKSLSGSP
L
KVKNSKNSKSPEEHLEEMMKMMSPNKLHTNFHIPKKGPPAKKPGKHSDKPLKAKGRSKGILNGQKSTGN
S
KSPKKGLKTPKTKMKQMTLLDMAKGTQKMTRAPRNSGGTPRTSSKPHKHLPPAALHLIAYYKENKDRED
K
RSALSCVISKTARLLSSEDRARLPEELRSLVQKRYELLEHKKRWASMSEEQRKEYLKKKREELKKKLKE
K
AKERREKEMLERLEKQKRYEDQELTGKNLPAFRLVDTPEGLPNTLFGDVAMVVEFLSCYSGLLLPDAQY
P
ITAVSLMEALSADKGGFLYLNRVLVILLQTLLQDEIAEDYGELGMKLSEIPLTLHSVSELVRLCLRRSD
V
QEESEGSDTDDNKDSAAFEDNEVQDEFLEKLETSEFFELTSEEKLQILTALCHRILMTYSVQDHMETRQ
Q
MSAELWKERLAVLKEENDKKRAEKQKRKEMEAKNKENGKVENGLGKTDRKKEIVKFEPQVDTEAEDMIS
A
VKSRRLLAIQAKKEREIQEREMK
VKLERQAEEERIRKHKAAAEKAFQEGIAKAKLVMRRTPIGTDRNHN
R
YWLFSDEVPGLFIEKGWVHDSIDYRFNHHCKDHTVSGDEDYCPRSKKANLGKNASMNTQHGTATEVAVE
T
TTPKQGQNL
WFLCDSQKELDELLNCLHPQGIRESQLKERLEKRYQDIIHSIHLARKPNLGLKSCDGNQE
L
LNFLRSDLIEVATRLQKGGLGYVEETSEFEAR
VISLEKLKDFGECVIALQASVIKKFLQGFMAPKQKRR
K
LQSEDSAKTEEVDEEKKMVEEAK
VASALEKWKTAIREAQTFSRMHVLLGMLDACIKWDMSAENARCKVC
R
KK
GEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPATARRNSRGRNYTEESASEDSEDDESD
E
EEEEEEEEEEEEDYEVAGLR
LRPRKTIRGKHSVIPPAARSGRRPGKKPHSTRRSQPKAPPVDDAEVDEL
V
LQTKRSSRRQSLELQKCEEILHKIVKYRFSWPF
REPVTRDEAEDYYDVITHPMDFQTVQNKCSCGSYRS
V
QEFLTDMKQVFTNAEVYNCRGSHVLSCMVKTEQCLVALLHKHLPGHPYVRRKRKKFPDRLAEDEGDSEP
E
AVGQSRGRRQKK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser