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Report for CCDS55508.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55508.1 Public Homo sapiens X MAP7D3 24 110 108 CCDS HistoryNCBI Gene:79649Re-query CCDS DB by CCDS ID:55508.1Re-query CCDS DB by GeneID:79649See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55508.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370661.5 ENSP00000359695.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370661.5Link to Ensembl Protein Viewer:ENSP00000359695.1Re-query CCDS DB by Nucleotide ID:ENST00000370661Re-query CCDS DB by Protein ID:ENSP00000359695
Original member Current member NCBI NM_001173517.2 NP_001166988.1 Accepted alive Link to Nucleotide Sequence:NM_001173517.2Link to Protein Sequence:NP_001166988.1Re-query CCDS DB by Nucleotide ID:NM_001173517Re-query CCDS DB by Protein ID:NP_001166988Link to BLAST:NP_001166988.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166988.1 841 Q8IWC1-3 841 100% 0 0

Chromosomal Locations for CCDS 55508.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 136219430 136219495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136219593 136219671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136220765 136220963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136222393 136222486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136224827 136224880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136225909 136226013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136227284 136227431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136228623 136228758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136230385 136230593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136230839 136230966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136231544 136232220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136236244 136236339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136241160 136241277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136244632 136244795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136246065 136246148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136246243 136246341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136251289 136251358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2526 nt):
ATGATGGCGGACGGCGCCGCAGCTGGCGCTGGCGGCAGCCCATCCTTGAGAGAGCTGCGGGCACGGATGG
TTGCTGCAGCAAACGAGATTGCTAAGGAAAGGAGGAAGCAAGATGTGGTTAATCGTGTTGCAACCCATTC
CTCAAATATAAGATCGACATTTAAACCAGTAATCGATGGATCCATGCTTAAAAATGACATAAAACAAAGA
TTAGCAAGAGAGCGCAGAGAGGAGAAAAGGAGACAGCAAGACGCCAATAAAGAAACACAACTACTTGAAA
AAGAAAGAAAGACCAAGCTCCAATATGAAAAACAGATGGAGGAAAGACAGAGAAAGCTGAAGGAGCGAAA
AGAGAAAGAAGAACAACGGAGAATAGCTGCAGAAGAAAAAAGACACCAGAAGGATGAAGCACAAAAGGAA
AAATTTACAGCCATTCTTTATCGTACTTTGGAACGGAGGAGACTTGCTGATGATTATCAGCAAAAAAGAT
GGTCATGGGGAGGCTCTGCAATGGCGAATTCTGAGAGCAAAACTGGGAAAACAGACAAGGAGAGAAGCTC
ATCTTTAAATAGAAGAGATAGTAACCTACATTCGTCTACTGATAAAGAACAAGCCGAAAGGAAGCCACGT
GTTACAGGCGTCACCAATTATGTAATGCAGTATGTCACTGTACCCTTGCGTAAATGTACTAGCGACGAAT
TGAGGGCTGTTATGTTTCCCATGTCGACAATGAAAATACCTCCTCAAACAAAAGTAGAAGAGTCTCCCTT
GGAGAAAGTAGAGACACCTCCCAAGGCAAGTGTGGATGCACCCCCCCAGGTGAATGTGGAAGTATTCTGC
AACACAAGCATGGAAGCGTCCCCCAAGGCAGGTGTGGGCATGGCCCCTGAGGTGAGCACGGACTCATTCC
CTGTGGTGAGCGTGGACGTGTCGCCTGTGGTGAGCACATATGATTCTGAGATGAGCATGGACGCATCCCC
CGAGTTGAGCATAGAAGCACTCCCGAAGGTGGACCTGGAAACAGTTCCCAAGGTGAGCATAGTAGCATCC
CCGGAGGCGAGCCTGGAAGCACCCCCGGAAGTGAGTCTGGAAGCACTGCCAGAGGTGAGCGTGGAAGCAG
CCCCAGAGGGGAGCCTGGAAGCACCTCCCAAGGGGAGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGG
GTCACCCAAGGAGAGCATGGAGGCATCTCCTGAGGCGATGGTGAAAGCATCCCCCAAGACATCCCTTGAA
GCAAGCATGGAAGCATCTCCCAAGGCAAAAGCGAGAGACGCTCCAAAGAAATCAGAAATGGACAAACAGG
CCTTAATCCCTATTGCCAAGAAGCGTCTATCATCATACACTGAGTGTTATAAATGGTCATCATCTCCTGA
AAATGCTTGTGGTCTGCCGTCTCCCATCAGCACTAACAGGCAAATCCAAAAGAACTGCCCTCCATCACCA
TTACCACTTATTTCAAAACAGTCACCACAGACTTCTTTTCCTTATAAAATAATGCCTATTCAACACACCC
TGTCTGTGCAAAGTGCATCAAGTACTGTCAAAAAGAAAAAAGAAACAGTTTCTAAAACCACTAACAGATG
TGAGGCTTTGAGCCAAAGGCATATGATCTATGAAGAGTCTGGTAATAAGAGTACTGCAGGTATTATGAAT
GCCGAGGCGGCAACAAAAATTTTGACAGAATTGCGCCGCCTTGCTCGTGAACAAAGAGAAAAAGAGGAAG
AAGAAAGACAACGGGAAGAAATGCAGCAAAGGGTCATTAAGAAATCAAAAGACATGGCAAAGGAAGCAGT
TGGAGGCCAAGCAGAAGACCACTTGAAACTCAAAGATGGGCAGCAACAAAATGAGACTAAAAAGAAGAAA
GGATGGCTGGATCAGGAAGACCAGGAAGCACCACTGCAGAAAGGGGACGCCAAAATAAAAGCTCAAGAGG
AAGCTGACAAACGCAAGAAAGAACACGAGAGAATTATGTTACAAAATTTACAAGAACGGTTAGAAAGGAA
AAAGAGAATAGAAGAAATTATGAAGCGGACAAGAAAGACAGATGTGAATGCCTCAAAGGTCACAGAAACA
TCCAGCCATGACATATATGAAGAGGCTGAGGCTGACAACGAAGAAAGCGACAAGGACTCATTGAATGAAA
TGTTTCCATCAGCCATTCTAAATGGCACAGGCTCACCTACCAAATTTAAAATGCCGTTCAACAATGCCAA
GAAAATGACACACAAGCTGGTATTTCTAGAAGATGGTACCAGCCAGGTCCGTAAAGAGCCAAAAACATAT
TTTAATGGCGATTTGAAAAACTTCAGACAAAAAAGCATGAAAGACACTTCAATACAGGAAGTAGTTTCAA
GACCATCTTCCAAAAGAATGACCAGTCACACAACGAAAACCAGAAAGGCGGATGAAACCAACACCACCAG
CAGATCCTCTGCACAAACAAAATCTGAAGGATTCCATGACATCTTGCCAAAGTCCTCAGACACCTTTAGA
CAATAA

Translation (841 aa):
MMADGAAAGAGGSPSLRELRARMVAAANEIAKERRKQDVVNRVATHSSNIRSTFKPVIDGSMLKNDIKQR
LARERREEKRRQQDANKETQLLEKERKTKLQYEKQMEERQRKLKERKEKEEQRRIAAEEKRHQKDEAQKE
KFTAILYRTLERRRLADDYQQKRWSWGGSAMANSESKTGKTDKERSSSLNRRDSNLHSSTDKEQAERKPR
VTGVTNYVMQYVTVPLRKCTSDELRAVMFPMSTMKIPPQTKVEESPLEKVETPPKASVDAPPQVNVEVFC
NTSMEASPKAGVGMAPEVSTDSFPVVSVDVSPVVSTYDSEMSMDASPELSIEALPKVDLETVPKVSIVAS
PEASLEAPPEVSLEALPEVSVEAAPEGSLEAPPKGSAEVAPKESVKGSPKESMEASPEAMVKASPKTSLE
ASMEASPKAKARDAPKKSEMDKQALIPIAKKRLSSYTECYKWSSSPENACGLPSPISTNRQIQKNCPPSP
LPLISKQSPQTSFPYKIMPIQHTLSVQSASSTVKKKKETVSKTTNRCEALSQRHMIYEESGNKSTAGIMN
AEAATKILTELRRLAREQREKEEEERQREEMQQRVIKKSKDMAKEAVGGQAEDHLKLKDGQQQNETKKKK
GWLDQEDQEAPLQKGDAKIKAQEEADKRKKEHERIMLQNLQERLERKKRIEEIMKRTRKTDVNASKVTET
SSHDIYEEAEADNEESDKDSLNEMFPSAILNGTGSPTKFKMPFNNAKKMTHKLVFLEDGTSQVRKEPKTY
FNGDLKNFRQKSMKDTSIQEVVSRPSSKRMTSHTTKTRKADETNTTSRSSAQTKSEGFHDILPKSSDTFR
Q


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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