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Report for CCDS55659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55659.1 Public Homo sapiens 1 KIFAP3 24 110 108 CCDS HistoryNCBI Gene:22920Re-query CCDS DB by CCDS ID:55659.1Re-query CCDS DB by GeneID:22920See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 55659.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000538366.5 ENSP00000444622.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538366.5Link to Ensembl Protein Viewer:ENSP00000444622.1Re-query CCDS DB by Nucleotide ID:ENST00000538366Re-query CCDS DB by Protein ID:ENSP00000444622
Original member Current member NCBI NM_001204514.2 NP_001191443.1 Accepted alive Link to Nucleotide Sequence:NM_001204514.2Link to Protein Sequence:NP_001191443.1Re-query CCDS DB by Nucleotide ID:NM_001204514Re-query CCDS DB by Protein ID:NP_001191443Link to BLAST:NP_001191443.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191443.1 714 Q92845-4 714 100% 0 0

Chromosomal Locations for CCDS 55659.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 169921676 169921781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169954011 169954110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169961046 169961235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169972513 169972598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169978085 169978183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169981972 169982097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169982702 169982867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169983270 169983382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169984582 169984690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169992155 169992255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170016462 170016624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170024418 170024596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170031886 170031984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170034372 170034496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170035454 170035553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170038290 170038431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170039233 170039288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170041677 170041761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2145 nt):
ATGTCGATTGCCCTTGGCAACACTTACCGGAGAAGTCTTTCAGATTCAGAAACTGTTTCTGTACTCCAAG
CAAGCTTATGTGAAGAGAAAAAAGAAAAATCAAGCAAGCCTAAAGATCCACCTCCTTTTGAAGGAATGGA
GATTGATGAAGTTGCTAACATTAATGACATGGATGAATATATTGAGTTATTATATGAAGATATTCCTGAC
AAAGTTCGGGGTTCTGCTTTGATCCTGCAGCTTGCTCGAAATCCTGATAACTTGGAAGAACTACTATTGA
ATGAAACTGCCCTTGGTGCATTAGCAAGGGTCCTGAGAGAAGACTGGAAGCAAAGTGTCGAGTTAGCTAC
AAACATAATTTACATCTTTTTTTGTTTCTCCAGCTTTTCTCAATTTCATGGACTTATTACTCACTATAAA
ATTGGAGCTCTGTGTATGAATATTATTGATCATGAGTTAAAAAGACATGAGCTTTGGCAAGAAGAACTCT
CAAAGAAGAAGAAAGCTGTTGATGAAGACCCTGAAAACCAAACCTTGAGAAAGGATTATGAAAAAACCTT
TAAAAAGTACCAGGGGCTTGTGGTAAAACAGGAACAGCTATTACGAGTTGCTCTTTATTTGCTTCTGAAT
CTTGCTGAGGATACTCGTACCGAACTGAAAATGAGGAACAAGAACATAGTTCACATGTTGGTGAAAGCCC
TTGATCGGGACAATTTTGAGCTGCTAATTTTAGTTGTGTCATTCTTGAAGAAACTCAGCATTTTTATGGA
GAATAAAAATGATATGGTGGAAATGGATATTGTTGAAAAACTGGTGAAAATGATACCTTGTGAGCATGAA
GACCTGCTGAATATCACCCTCCGACTTTTACTAAACCTATCCTTTGACACAGGACTGAGGAATAAGATGG
TACAAGTTGGACTGCTTCCCAAGCTCACTGCACTCCTAGGCAATGACAACTACAAACAAATAGCAATGTG
TGTTCTTTACCACATAAGCATGGATGACCGCTTTAAATCAATGTTTGCATACACTGACTGTATACCACAG
TTAATGAAGATGCTGTTTGAATGTTCAGATGAACGAATTGACTTGGAACTCATTTCTTTCTGCATTAATC
TTGCTGCTAACAAAAGAAATGTACAGCTTATCTGTGAAGGAAATGGGCTGAAGATGCTCATGAAGAGGGC
TCTGAAGTTTAAGGATCCATTGCTGATGAAAATGATTAGAAACATTTCTCAGCATGATGGACCAACTAAA
AATCTGTTTATTGATTATGTTGGGGACCTTGCAGCCCAGATCTCTAATGATGAAGAAGAGGAGTTTGTGA
TTGAATGTTTGGGAACTCTTGCAAACTTGACCATTCCAGACTTAGACTGGGAATTGGTTCTTAAAGAATA
TAAGTTGGTTCCATACCTCAAGGATAAACTAAAACCAGGTGCTGCAGAAGATGATCTTGTTTTAGAAGTG
GTTATAATGATTGGAACTGTATCCATGGATGACTCTTGTGCTGCATTGCTAGCCAAATCTGGCATAATCC
CTGCACTCATTGAATTGCTAAATGCTCAACAAGAAGATGATGAATTTGTGTGTCAGATAATTTATGTCTT
CTACCAGATGGTTTTCCACCAAGCCACAAGAGACGTCATAATCAAGGAAACACAGGCTCCAGCATATCTC
ATAGACCTAATGCATGATAAGAATAATGAAATCCGAAAGGTCTGTGATAATACATTAGATATTATAGCGG
AATATGATGAAGAATGGGCTAAGAAAATTCAGAGTGAAAAGTTTCGCTGGCATAACTCTCAGTGGCTGGA
GATGGTAGAGAGTCGTCAGATGGATGAGAGTGAGCAGTACTTGTATGGTGATGATCGAATTGAGCCATAC
ATTCATGAAGGAGATATTCTCGAAAGACCTGACCTTTTCTACAACTCAGATGGATTAATTGCCTCTGAAG
GAGCCATAAGTCCCGATTTCTTCAATGATTACCACCTTCAAAATGGAGATGTTGTTGGGCAGCATTCATT
TCCTGGCAGCCTTGGAATGGATGGCTTTGGCCAACCAGTTGGCATTCTTGGACGCCCTGCCACAGCATAT
GGATTCCGCCCTGATGAACCTTACTACTATGGCTATGGATCTTGA

Translation (714 aa):
MSIALGNTYRRSLSDSETVSVLQASLCEEKKEKSSKPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPD
KVRGSALILQLARNPDNLEELLLNETALGALARVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYK
IGALCMNIIDHELKRHELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLN
LAEDTRTELKMRNKNIVHMLVKALDRDNFELLILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHE
DLLNITLRLLLNLSFDTGLRNKMVQVGLLPKLTALLGNDNYKQIAMCVLYHISMDDRFKSMFAYTDCIPQ
LMKMLFECSDERIDLELISFCINLAANKRNVQLICEGNGLKMLMKRALKFKDPLLMKMIRNISQHDGPTK
NLFIDYVGDLAAQISNDEEEEFVIECLGTLANLTIPDLDWELVLKEYKLVPYLKDKLKPGAAEDDLVLEV
VIMIGTVSMDDSCAALLAKSGIIPALIELLNAQQEDDEFVCQIIYVFYQMVFHQATRDVIIKETQAPAYL
IDLMHDKNNEIRKVCDNTLDIIAEYDEEWAKKIQSEKFRWHNSQWLEMVESRQMDESEQYLYGDDRIEPY
IHEGDILERPDLFYNSDGLIASEGAISPDFFNDYHLQNGDVVGQHSFPGSLGMDGFGQPVGILGRPATAY
GFRPDEPYYYGYGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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