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Report for CCDS56038.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56038.1 Public Homo sapiens 17 KAT7 24 110 108 CCDS HistoryNCBI Gene:11143Re-query CCDS DB by CCDS ID:56038.1Re-query CCDS DB by GeneID:11143See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56038.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000510819.5 ENSP00000423385.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000510819.5Link to Ensembl Protein Viewer:ENSP00000423385.1Re-query CCDS DB by Nucleotide ID:ENST00000510819Re-query CCDS DB by Protein ID:ENSP00000423385
Original member Current member NCBI NM_001199158.2 NP_001186087.1 Accepted alive Link to Nucleotide Sequence:NM_001199158.2Link to Protein Sequence:NP_001186087.1Re-query CCDS DB by Nucleotide ID:NM_001199158Re-query CCDS DB by Protein ID:NP_001186087Link to BLAST:NP_001186087.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186087.1 442 O95251-3 442 100% 0 0

Chromosomal Locations for CCDS 56038.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 49788835 49788849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49791886 49792033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49805363 49805445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49811476 49811574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49815803 49815913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49817820 49818011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49821337 49821426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49821650 49821790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49823202 49823295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49826000 49826146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49826693 49826799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49827401 49827502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1329 nt):
ATGCCGCGAAGGAAGAGGAATGCAGGCAGTAGTTCAGATGGAACCGAAGATTCCGATTTTTCTACAGATC
TCGAGCACACAGACAGTTCAGAAAGTGATGGCACATCCCGACGATCTGCTCGAGTCACCCGCTCCTCAGC
CAGGCTAAGCCAGAGTTCTCAAGGACACCTTACAGGAAAACATGAGAGACATTTCTCCATCTCAGGATGC
CCACTGTATCATAACCTCTCAGCTGACGAATGCAAGGCACCAACGGAGAGACAGCTTCGATATAAGGAAA
AAGTGGCTGAACTCAGGAAGAAAAGAAATTCTGGACTGAGCAAAGAACAGAAAGAGAAATATATGGAACA
CAGACAGACCTATGGGAACACACGGGAACCTCTTTTAGAAAACCTGACAAGCGAGTATGACTTGGATCTT
TTCCGAAGAGCACAAGCCCGGGCTTCAGAGGATTTGGAGAAGTTAAGGCTGCAAGGCCAAATCACAGAGG
GAAGCAACATGATTAAAACAATTGCTTTTGGCCGCTATGAGCTTGATACCTGGTATCATTCTCCATATCC
TGAAGAATATGCACGGCTGGGACGTCTCTATATGTGTGAATTCTGTTTAAAATATATGAAGAGCCAAACG
ATACTCCGCCGGCACATGGCCAAATGTGTGTGGAAACACCCACCTGGTGATGAGATATATCGCAAAGGTT
CAATCTCTGTGTTTGAAGTGGATGGCAAGAAAAACAAGATCTACTGCCAAAACCTGTGCCTGTTGGCCAA
ACTTTTTCTGGACCACAAGACATTATATTATGATGTGGAGCCCTTCCTGTTCTATGTTATGACAGAGGCG
GACAACACTGGCTGTCACCTGATTGGATATTTTTCTAAGGAAAAGAATTCATTCCTCAACTACAACGTCT
CCTGTATCCTTACTATGCCTCAGTACATGAGACAGGGCTATGGCAAGATGCTTATTGATTTCAGTTATTT
GCTTTCCAAAGTCGAAGAAAAAGTTGGCTCCCCAGAACGTCCACTCTCAGATCTGGGGCTTATAAGCTAT
CGCAGTTACTGGAAAGAAGTACTTCTCCGCTACCTGCATAATTTTCAAGGCAAAGAGATTTCTATCAAAG
AAATCAGTCAGGAGACGGCTGTGAATCCTGTGGACATTGTCAGCACTCTGCAAGCCCTTCAGATGCTCAA
ATACTGGAAGGGAAAACACCTAGTTTTAAAGAGACAGGACCTGATTGATGAGTGGATAGCCAAAGAGGCC
AAAAGGTCCAACTCCAATAAAACCATGGATCCCAGCTGCTTAAAATGGACCCCTCCCAAGGGCACTTAA

Translation (442 aa):
MPRRKRNAGSSSDGTEDSDFSTDLEHTDSSESDGTSRRSARVTRSSARLSQSSQGHLTGKHERHFSISGC
PLYHNLSADECKAPTERQLRYKEKVAELRKKRNSGLSKEQKEKYMEHRQTYGNTREPLLENLTSEYDLDL
FRRAQARASEDLEKLRLQGQITEGSNMIKTIAFGRYELDTWYHSPYPEEYARLGRLYMCEFCLKYMKSQT
ILRRHMAKCVWKHPPGDEIYRKGSISVFEVDGKKNKIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVMTEA
DNTGCHLIGYFSKEKNSFLNYNVSCILTMPQYMRQGYGKMLIDFSYLLSKVEEKVGSPERPLSDLGLISY
RSYWKEVLLRYLHNFQGKEISIKEISQETAVNPVDIVSTLQALQMLKYWKGKHLVLKRQDLIDEWIAKEA
KRSNSNKTMDPSCLKWTPPKGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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