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Report for CCDS56109.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56109.1 Public Homo sapiens 19 ZNF587B 24 110 108 CCDS HistoryNCBI Gene:100293516Re-query CCDS DB by CCDS ID:56109.1Re-query CCDS DB by GeneID:100293516See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56109.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000442832.8 ENSP00000392410.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000442832.8Link to Ensembl Protein Viewer:ENSP00000392410.2Re-query CCDS DB by Nucleotide ID:ENST00000442832Re-query CCDS DB by Protein ID:ENSP00000392410
Original member Current member NCBI NM_001204818.2 NP_001191747.1 Accepted alive Link to Nucleotide Sequence:NM_001204818.2Link to Protein Sequence:NP_001191747.1Re-query CCDS DB by Nucleotide ID:NM_001204818Re-query CCDS DB by Protein ID:NP_001191747Link to BLAST:NP_001191747.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191747.1 402 E7ETH6 402 100% 0 0

Chromosomal Locations for CCDS 56109.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57830529 57830564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57839023 57839149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57840838 57841796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57844256 57844342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGGCGGTGGTGGCCACGCTGAGGCTCTCTGCTCAGGGCACAGTGACTTTTGAAGACGTGGCTGTGAAAT
TTACCCAGGAGGAATGGAATCTCCTTAGTGAGGCTCAGAGATGCCTGTACCGTGATGTGACTCTGGAGAA
CCTGGCACTTATGTCCTCCCTGGGTTGTTGGTGTGGAGTGGAAGATGAGGCGGCACCTTCTAAGCAGAGT
ATTTATATACAAAGAGAGACTCAGGTCAGGACTCCTGTGACAGGTGTGTCTCCCAAGAAGGCCCACCCCT
GTGAGATGTGTGGCCCGATCTTGGGAGACATTTTGCATGTGGCAGATCATCAGGGAACACATCACAAGCA
GAAACTGCACAGGTGTGAGGCCTGGGGGAATAAATTGTATGACAGTGGAAACTTTCATCAGCACCAGAAT
GAGCACATTGGAGAGAAACCCTACAGAGGGAGTGTTGAGGAGGCGTTGTTTGTGAAGAGGTGTAAGTTGC
ATGTGTCAGGGGAGTCATCTGTCTTCAGTGAGAGTGGGAAGGACTTTTTGCCCAGGTCAGGATTACTCCA
GCAGGAGGCCAGTCACACTGGGGAGAAGTCAAACAGCAAAACTGAGTGTGTGTCTCCCTTTCAGTGTGGG
GGAGCTCACTATAGCCATGGAGATTCCATGAAACATTTTAGCACCAAACATATACTCAGTCAGCACCAGA
GACTTCTCCCTCGAGAAGAATGTTATGTGTGCTGTGAATGTGGGAAATCCTTTAGCAAATATGTTAGCTT
CAGTAATCATCAGAGAGTTCACAGTGGAAAAAGACCTTATGAATGTGGAGAATGTGAGAAATCTTTTAGT
CAAAAGAGCAGCCTCATTCAACATCAGCAATTTCACACTGGAGGAAAACCTTATGGGTGTGAAGAATGTG
GGAAATATTTTAGCTTAGAAGGATATCTTAGGCGCCATCAAAAAGTTCACGCTGGAAAAGGGCCTTATGA
GTGTGGAGAATGTGGGAAATCTTTTAGTTCAAACGTGAACCTTAAGAGTCATCAGCGCATTCACACTGGA
GAGAGACCTTACAAGTGTGGAGAATGTGAGAAATCTTTTAGTCGGAAGCCCAGCCTTAGTTACCATCAGC
GCTTTGGGAGGCCGAGGTGGGTGGATCACAAGGACAGGAAGGAGTTCAAGACCAGCCTGGGCAATATAGT
GAAATCCTGTCTCTTCTAA

Translation (402 aa):
MAVVATLRLSAQGTVTFEDVAVKFTQEEWNLLSEAQRCLYRDVTLENLALMSSLGCWCGVEDEAAPSKQS
IYIQRETQVRTPVTGVSPKKAHPCEMCGPILGDILHVADHQGTHHKQKLHRCEAWGNKLYDSGNFHQHQN
EHIGEKPYRGSVEEALFVKRCKLHVSGESSVFSESGKDFLPRSGLLQQEASHTGEKSNSKTECVSPFQCG
GAHYSHGDSMKHFSTKHILSQHQRLLPREECYVCCECGKSFSKYVSFSNHQRVHSGKRPYECGECEKSFS
QKSSLIQHQQFHTGGKPYGCEECGKYFSLEGYLRRHQKVHAGKGPYECGECGKSFSSNVNLKSHQRIHTG
ERPYKCGECEKSFSRKPSLSYHQRFGRPRWVDHKDRKEFKTSLGNIVKSCLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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