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Report for CCDS56110.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56110.1 Public Homo sapiens 19 ZNF587 24 110 108 CCDS HistoryNCBI Gene:84914Re-query CCDS DB by CCDS ID:56110.1Re-query CCDS DB by GeneID:84914See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56110.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423137.1 ENSP00000393865.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423137.1Link to Ensembl Protein Viewer:ENSP00000393865.1Re-query CCDS DB by Nucleotide ID:ENST00000423137Re-query CCDS DB by Protein ID:ENSP00000393865
Original member Current member NCBI NM_001204817.2 NP_001191746.1 Accepted alive Link to Nucleotide Sequence:NM_001204817.2Link to Protein Sequence:NP_001191746.1Re-query CCDS DB by Nucleotide ID:NM_001204817Re-query CCDS DB by Protein ID:NP_001191746Link to BLAST:NP_001191746.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191746.1 574 Q96SQ5-2 574 100% 0 0

Chromosomal Locations for CCDS 56110.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57850039 57850071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57856107 57856233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57858576 57860140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1725 nt):
ATGGCAGCGGCTGTGCCGAGGCGCCCAACTCAGGGCACTGTGACCTTTGAAGATGTGGCTGTGAACTTTT
CC
CAGGAGGAGTGGTGTCTTCTTAGTGAGGCTCAGAGGTGCTTGTACCGTGATGTGATGCTAGAGAACCT
G
GCTCTCATATCCTCGCTGGGTTGTTGGTGTGGATCAAAAGATGAGGAGGCACCTTGTAAGCAGAGAATT
TCT
GTACAAAGAGAGTCTCAGAGCAGGACTCCTAGGGCAGGTGTTTCTCCTAAGAAGGCTCACCCCTGTG
AA
ATGTGTGGCCTCATCTTGGAGGATGTTTTTCACTTTGCTGACCACCAGGAAACTCATCACAAGCAGAA
G
CTGAACAGGAGTGGAGCATGTGGAAAAAACTTGGATGACACTGCATACCTTCATCAGCACCAGAAGCAG
CAT
ATTGGAGAGAAATTCTACAGAAAGAGTGTCAGAGAAGCATCGTTTGTAAAGAAACGTAAGCTCAGGG
TG
TCACAGGAGCCATTTGTCTTCCGCGAGTTTGGGAAGGACGTTCTGCCCAGTTCAGGATTGTGCCAAGA
A
GAAGCTGCTGTAGAGAAGACAGACAGTGAAACTATGCATGGCCCACCCTTTCAGGAGGGAAAAACTAAT
TAC
AGTTGTGGAAAACGCACAAAAGCCTTCAGCACCAAACACTCAGTTATTCCACACCAGAAACTTTTCA
CT
AGAGATGGATGTTATGTGTGCAGTGATTGTGGAAAATCCTTTAGCAGATATGTCAGCTTCAGTAATCA
T
CAGCGAGATCACACTGCAAAAGGACCTTATGATTGTGGAGAGTGTGGGAAATCTTATAGTCGAAAGAGC
AGC
CTTATTCAACATCAGCGAGTCCACACTGGACAGACAGCTTATCCCTGTGAGGAGTGCGGGAAATCTT
TT
AGTCAGAAGGGCAGCCTTATTAGCCATCAGCTTGTTCACACTGGAGAAGGGCCTTATGAGTGTAGAGA
A
TGTGGGAAATCTTTTGGTCAAAAGGGTAACCTCATTCAACATCAGCAAGGTCACACTGGAGAGAGAGCT
TAT
CACTGTGGGGAATGTGGGAAATCTTTTCGTCAGAAGTTCTGCTTTATTAACCATCAGCGTGTTCACA
CT
GGAGAAAGGCCTTACAAGTGTGGAGAATGTGGGAAATCTTTTGGTCAAAAGGGCAACCTCGTTCACCA
T
CAGCGAGGTCATACTGGAGAAAGGCCCTATGAGTGCAAGGAATGTGGGAAATCATTTAGGTACAGATCC
CAC
CTCACTGAACACCAGAGACTTCACACTGGGGAAAGACCTTACAATTGTAGGGAATGTGGGAAATTAT
TT
AACAGGAAGTATCATCTTCTGGTTCATGAGAGAGTTCACACTGGAGAAAGGCCATATGCGTGTGAGGT
A
TGTGGGAAATTATTTGGCAATAAGCACAGCGTGACTATACATCAGAGGATTCACACTGGAGAAAGGCCG
TAT
GAATGCAGTGAATGTGGGAAATCATTTCTTTCCAGCTCTGCGCTTCATGTTCATAAAAGAGTTCATT
CT
GGACAAAAGCCTTATAAGTGCAGTGAATGTGGAAAATCCTTTTCTGAATGTTCCAGTCTCATTAAACA
C
AGGAGAATTCACACTGGAGAAAGGCCTTATGAATGCACCAAATGTGGAAAAACATTTCAGCGAAGCTCT
ACC
CTCCTTCATCATCAGAGTTCACACAGGAGAAAGGCCTTATGA


Translation (574 aa):
MAAAVPRRPTQGTVTFEDVAVNFSQEEWCLLSEAQRCLYRDVMLENLALISSLGCWCGSKDEEAPCKQRI
S
VQRESQSRTPRAGVSPKKAHPCEMCGLILEDVFHFADHQETHHKQKLNRSGACGKNLDDTAYLHQHQKQ
H
IGEKFYRKSVREASFVKKRKLRVSQEPFVFREFGKDVLPSSGLCQEEAAVEKTDSETMHGPPFQEGKTN
Y
SCGKRTKAFSTKHSVIPHQKLFTRDGCYVCSDCGKSFSRYVSFSNHQRDHTAKGPYDCGECGKSYSRKS
S
LIQHQRVHTGQTAYPCEECGKSFSQKGSLISHQLVHTGEGPYECRECGKSFGQKGNLIQHQQGHTGERA
Y
HCGECGKSFRQKFCFINHQRVHTGERPYKCGECGKSFGQKGNLVHHQRGHTGERPYECKECGKSFRYRS
H
LTEHQRLHTGERPYNCRECGKLFNRKYHLLVHERVHTGERPYACEVCGKLFGNKHSVTIHQRIHTGERP
Y
ECSECGKSFLSSSALHVHKRVHSGQKPYKCSECGKSFSECSSLIKHRRIHTGERPYECTKCGKTFQRSS
T
LLHHQSSHRRKAL




Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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