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Report for CCDS5617.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5617.1 Public Homo sapiens 7 GTPBP10 24 110 108 CCDS HistoryNCBI Gene:85865Re-query CCDS DB by CCDS ID:5617.1Re-query CCDS DB by GeneID:85865See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5617.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000222511.11 ENSP00000222511.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000222511.11Link to Ensembl Protein Viewer:ENSP00000222511.7Re-query CCDS DB by Nucleotide ID:ENST00000222511Re-query CCDS DB by Protein ID:ENSP00000222511
Original member Current member NCBI NM_033107.4 NP_149098.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033107.4Link to Protein Sequence:NP_149098.2Re-query CCDS DB by Nucleotide ID:NM_033107Re-query CCDS DB by Protein ID:NP_149098Link to BLAST:NP_149098.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149098.2 387 A4D1E9-1 387 100% 0 0

Chromosomal Locations for CCDS 5617.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 90346742 90346774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90352816 90353009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90354458 90354549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90355086 90355230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90372155 90372228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90374302 90374354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90377507 90377614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90378134 90378211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90382956 90383079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90384892 90385154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1164 nt):
ATGGTGCATTGCAGTTGCGTGTTGTTCAGAAAGTATGGAAATTTCATCGATAAGCTAAGACTCTTCACCA
GGGGAGGATCCGGTGGAATGGGTTATCCTCGTTTAGGTGGAGAAGGTGGAAAAGGTGGTGATGTCTGGGT
TGTAGCCCAGAACAGAATGACTTTAAAACAACTTAAAGACAGGTATCCTCGGAAACGGTTTGTGGCTGGA
GTAGGAGCAAACAGCAAAATTAGTGCACTGAAAGGCTCCAAAGGAAAAGACTGTGAAATCCCTGTGCCTG
TGGGTATTTCAGTAACTGATGAAAATGGTAAAATTATAGGAGAACTCAATAAAGAAAATGACAGAATTTT
GGTAGCTCAAGGAGGTCTTGGTGGTAAATTACTTACAAATTTCTTACCATTGAAAGGCCAGAAACGAATA
ATTCACCTTGATCTAAAACTTATAGCTGATGTAGGCCTAGTAGGATTCCCAAATGCTGGAAAATCCTCTT
TGCTAAGTTGTGTTTCTCATGCAAAACCTGCAATTGCAGATTACGCATTTACAACATTAAAGCCTGAACT
TGGAAAGATAATGTACAGTGATTTCAAACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCA
CATATGAACAAAGGAATGGGCCACAAATTCCTCAAGCATATAGAAAGAACTAGACAACTACTTTTTGTTG
TTGATATTTCTGGATTTCAGCTTTCTTCTCACACTCAATACAGGACAGCTTTTGAAACCATAATACTGCT
TACAAAAGAGTTGGAATTGTACAAAGAGGAACTTCAGACAAAACCTGCACTCTTGGCAGTTAATAAAATG
GACTTGCCAGATGCCCAAGATAAGTTCCATGAATTGATGAGCCAGCTCCAGAATCCTAAAGATTTTCTGC
ATTTATTTGAAAAAAACATGATTCCAGAGAGGACTGTAGAGTTCCAACATATCATCCCCATATCTGCAGT
TACTGGAGAAGGAATCGAAGAATTAAAGAATTGTATAAGAAAGTCACTGGATGAACAGGCCAACCAGGAA
AATGATGCACTTCATAAGAAACAGTTGCTTAATTTGTGGATTTCTGATACAATGTCTTCTACTGAGCCAC
CATCAAAGCATGCTGTTACTACTTCCAAAATGGATATAATTTAA

Translation (387 aa):
MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPRKRFVAG
VGANSKISALKGSKGKDCEIPVPVGISVTDENGKIIGELNKENDRILVAQGGLGGKLLTNFLPLKGQKRI
IHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGA
HMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKM
DLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQE
NDALHKKQLLNLWISDTMSSTEPPSKHAVTTSKMDII


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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