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Report for CCDS5635.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5635.1 Public Homo sapiens 7 BET1 24 110 108 CCDS HistoryNCBI Gene:10282Re-query CCDS DB by CCDS ID:5635.1Re-query CCDS DB by GeneID:10282See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5635.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000222547.8 ENSP00000222547.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000222547.8Link to Ensembl Protein Viewer:ENSP00000222547.3Re-query CCDS DB by Nucleotide ID:ENST00000222547Re-query CCDS DB by Protein ID:ENSP00000222547
Original member Current member NCBI NM_005868.6 NP_005859.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005868.6Link to Protein Sequence:NP_005859.1Re-query CCDS DB by Nucleotide ID:NM_005868Re-query CCDS DB by Protein ID:NP_005859Link to BLAST:NP_005859.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005859.1 118 O15155-1 118 100% 0 0

Chromosomal Locations for CCDS 5635.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 93994230 93994385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 93996265 93996321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 93999170 93999294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 94004198 94004216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGAGGCGTGCAGGCCTGGGTGAAGGAGTACCTCCTGGCAACTATGGGAACTATGGCTATGCTAATAGTG
GGTATAGTGCCTGTGAAGAAGAAAATGAGAGGCTCACTGAAAGTCTGAGAAGCAAAGTAACTGCTATAAA
ATCTCTTTCCATTGAAATAGGCCATGAAGTTAAAACCCAGAATAAATTATTAGCTGAAATGGATTCACAA
TTTGATTCCACAACTGGATTTCTAGGTAAAACTATGGGCAAACTGAAGATTTTATCCAGAGGGAGCCAAA
CAAAGCTGCTGTGCTATATGATGCTGTTTTCTTTATTTGTCTTTTTTATCATTTATTGGATTATTAAACT
GAGGTGA

Translation (118 aa):
MRRAGLGEGVPPGNYGNYGYANSGYSACEEENERLTESLRSKVTAIKSLSIEIGHEVKTQNKLLAEMDSQ
FDSTTGFLGKTMGKLKILSRGSQTKLLCYMMLFSLFVFFIIYWIIKLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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