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Report for CCDS56572.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56572.1 Public Homo sapiens 9 CIMIP2B 24 110 108 CCDS HistoryNCBI Gene:730112Re-query CCDS DB by CCDS ID:56572.1Re-query CCDS DB by GeneID:730112See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56572.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399742.7 ENSP00000382646.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399742.7Link to Ensembl Protein Viewer:ENSP00000382646.2Re-query CCDS DB by Nucleotide ID:ENST00000399742Re-query CCDS DB by Protein ID:ENSP00000382646
Original member Current member NCBI NM_001164310.3 NP_001157782.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001164310.3Link to Protein Sequence:NP_001157782.1Re-query CCDS DB by Nucleotide ID:NM_001164310Re-query CCDS DB by Protein ID:NP_001157782Link to BLAST:NP_001157782.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157782.1 275 A8MTA8-1 275 100% 0 0

Chromosomal Locations for CCDS 56572.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 35562007 35562095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35562380 35562574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35562649 35562700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35562875 35563080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35563166 35563389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35563767 35563828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGGCTGTGGCCAGCACCTTCATACCAGGGCTCAACCCTCAGAACCCTCATTATATCCCAGGGTACACTG
GACACTGCCCACTACTTCGGTTCAGCGTGGGCCAGACCTATGGGCAGGTGACTGGTCAGCTACTTCGAGG
CCCTCCTGGCCTAGCCTGGCCCCCTGTCCACCGCACACTTCTGCCTCCCATTCGGCCTCCAAGATCTCCT
GAGGTTCCCAGGGAGAGTCTACCTGTCAGGCGTGGGCAAGAAAGGCTCAGCTCCAGCATGATCCCTGGGT
ACACAGGTTTTGTACCCCGGGCACAGTTCATCTTTGCCAAGAACTGCAGCCAGGTCTGGGCCGAGGCTCT
GAGTGACTTTACTCACTTGCATGAAAAGCAAGGGAGTGAAGAGCTACCAAAGGAGGCCAAGGGAAGAAAG
GACACAGAGAAGGACCAGGTGCCAGAGCCGGAGGGGCAGCTGGAGGAGCCGACACTGGAGGTGGTGGAAC
AAGCTTCTCCCTACTCCATGGATGACAGGGACCCTCGGAAGTTCTTCATGTCAGGCTTCACTGGCTATGT
GCCCTGCGCCCGCTTCCTCTTCGGCTCCAGCTTTCCTGTGCTCACCAACCAGGCACTGCAGGAATTTGGG
CAGAAGCACTCACCAGGCAGTGCCCAGGACCCCAAACATCTCCCCCCACTTCCCAGAACATACCCTCAGA
ACCTGGGTCTTTTACCTAACTATGGGGGCTACGTGCCAGGGTATAAGTTCCAGTTTGGCCACACATTTGG
CCATCTCACCCATGATGCTCTGGGCCTCAGCACCTTCCAGAAGCAGCTCTTGGCTTAG

Translation (275 aa):
MAVASTFIPGLNPQNPHYIPGYTGHCPLLRFSVGQTYGQVTGQLLRGPPGLAWPPVHRTLLPPIRPPRSP
EVPRESLPVRRGQERLSSSMIPGYTGFVPRAQFIFAKNCSQVWAEALSDFTHLHEKQGSEELPKEAKGRK
DTEKDQVPEPEGQLEEPTLEVVEQASPYSMDDRDPRKFFMSGFTGYVPCARFLFGSSFPVLTNQALQEFG
QKHSPGSAQDPKHLPPLPRTYPQNLGLLPNYGGYVPGYKFQFGHTFGHLTHDALGLSTFQKQLLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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