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Report for CCDS57039.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57039.1 Public Mus musculus 16 Cryzl1 23 108 98 CCDS HistoryNCBI Gene:66609Re-query CCDS DB by CCDS ID:57039.1Re-query CCDS DB by GeneID:66609See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57039.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000117644.7 ENSMUSP00000113227.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117644.7Link to Ensembl Protein Viewer:ENSMUSP00000113227.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117644Re-query CCDS DB by Protein ID:ENSMUSP00000113227
Original member Current member NCBI NM_026994.1 NP_081270.1 Accepted alive Link to Nucleotide Sequence:NM_026994.1Link to Protein Sequence:NP_081270.1Re-query CCDS DB by Nucleotide ID:NM_026994Re-query CCDS DB by Protein ID:NP_081270Link to BLAST:NP_081270.1

Chromosomal Locations for CCDS 57039.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 91689816 91689915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91690704 91690749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91692599 91692704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91694182 91694300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91695261 91695359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91699177 91699288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91701072 91701205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91707225 91707293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91712195 91712267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91714749 91714826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 91717404 91717469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1002 nt):
ATGAAAGGCTTGTATTTTCAACAGAGTTCTACAAATGAAGAAGTAACATTTGTATTTCAAGAAAAGGAAA
ATGTCCCTGTCACAGAGGATAACTTTGTGAGAGTTCAAGTTAAAGCTTGTGCCCTGAGCCACATAAACAC
AAAGCTTCTAGCAGAAATGAAGATGGAAAAGGATTTCTTCCCTGTTGGAAGAGAAGTTTCTGGAATTGTA
TTAGAGGGAATTCTGCCTTTGGATTCCGAAGACCCCGGGCTCTGTGAGGTTATTCGAGTACATGAGCATT
ACCTGGTTCATAAGCCAGAAAAGGTGTCATGGACGGAAGCTGCTGGCGTCATCCGGGACGGAGTCCGAGC
CTGCACAGCTCTGTATTATCTTTCTCAACTCTCTCCTGGAAAGTCTGTGCTGATCATGGACGGGGCAAGT
GCATTTGGCACAATAGCCATTCAGTTAGCCCACCACAGAGGAGCCAAGGTTATCTCAACAGCACACAGCC
TGGAGGACAAGCAACATCTTGAAAGGCTTAGGCCTTCTATAGCCCGTGTGATTGATGTGTCTAATGGGAA
AGTCCATGTTGCTGAAAGCTGTTTGGAGGAAACAGGTGGCCTGGGAGTAGATATTGTCATAGATGCAGGA
GTGAGATTATATAGTAAAGATGATGAACCAGCTGTAAAGTTACATCTGCCACATAAGCATGACATCATCA
CACTTCTTGGTGTCGGAGGCCATTGGGTAACAACAGAAGAAAACCTTCAGTTGGATCCTCCAGATAGCCA
CTGCCTTTTCCTCAAGGGAGCAACGGTGGCTTTCCTTAATGATGAAGTTTGGAATTTGTCAAATGCACAA
CAGGGAAAATATCTTTGTATCTTAAAAGATGTGATGGAGAAGTTATCAGCTGGTGTTTTCAGGCCTCTGC
TCGATGAGCCCATCCCACTGTATGAGGCAAAGGTTTCCATGGAAGTTGTTCAGAAAAATCAAGAAAGAAA
AAAGCAAGTCGTTCAATTTTAA

Translation (333 aa):
MKGLYFQQSSTNEEVTFVFQEKENVPVTEDNFVRVQVKACALSHINTKLLAEMKMEKDFFPVGREVSGIV
LEGILPLDSEDPGLCEVIRVHEHYLVHKPEKVSWTEAAGVIRDGVRACTALYYLSQLSPGKSVLIMDGAS
AFGTIAIQLAHHRGAKVISTAHSLEDKQHLERLRPSIARVIDVSNGKVHVAESCLEETGGLGVDIVIDAG
VRLYSKDDEPAVKLHLPHKHDIITLLGVGGHWVTTEENLQLDPPDSHCLFLKGATVAFLNDEVWNLSNAQ
QGKYLCILKDVMEKLSAGVFRPLLDEPIPLYEAKVSMEVVQKNQERKKQVVQF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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