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Report for CCDS57070.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57070.1 Public Mus musculus 17 Ddah2 23 108 98 CCDS HistoryNCBI Gene:51793Re-query CCDS DB by CCDS ID:57070.1Re-query CCDS DB by GeneID:51793See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57070.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000174493.7 ENSMUSP00000134072.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000174493.7Link to Ensembl Protein Viewer:ENSMUSP00000134072.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000174493Re-query CCDS DB by Protein ID:ENSMUSP00000134072
Original member Current member NCBI NM_016765.3 NP_058045.1 Accepted alive Link to Nucleotide Sequence:NM_016765.3Link to Protein Sequence:NP_058045.1Re-query CCDS DB by Nucleotide ID:NM_016765Re-query CCDS DB by Protein ID:NP_058045Link to BLAST:NP_058045.1

Chromosomal Locations for CCDS 57070.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 35060165 35060461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35060603 35060702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35060833 35060906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35061005 35061124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35061476 35061599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35061791 35061810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (735 nt):
ATGGGGACGCCGGGGGAGGGGCTGGGTCGTTGTTCCCATGCCCTGATCCGGGGTGTCCCCGAGAGCTTGG
CATCCGGGGAAGGTGCTGGCGCTGGTCTTCCGGCTCTGGACCTGGCTAAAGCTCAAAGGGAGCATGGAGT
ACTAGGAGGTAAACTGAGGCAACGACTAGGGCTGCAGCTGCTTGAACTGCCTCCTGAGGAGTCACTGCCG
CTGGGACCACTGCTTGGTGACACGGCTGTGATCCAAGGAGACACGGCCCTAATCACAAGGCCCTGGAGCC
CAGCACGTAGGCCTGAGGTTGATGGAGTGCGTAAAGCCCTCCAGGACTTGGGACTCCGAATTGTGGAGAT
GGGGGATGAGAATGCGACGCTGGACGGCACCGACGTCCTCTTCACCGGCCGGGAGTTTTTCGTAGGCCTC
TCCAAGTGGACCAATCATCGAGGAGCTGAGATCGTGGCAGACACGTTCCGGGACTTCGCTGTCTCAACGG
TACCGGTCTCAGGCTCCTCGCACCTGCGCGGCCTCTGTGGCATGGGGGGACCTCGCACCGTGGTGGCTGG
AAGCAGCGAGGCTGCCCAAAAAGCAGTCAGGGCAATGGCAGCGCTGACTGATCACCCCTACGCCTCTCTG
ACCCTCCCAGATGATGCAGCTAGTGACTGTCTCTTTCTGCGTCCTGGGTTGCCTGGTGCCACACCTTTCC
TCCTGCACCGCGGAGGCTCTGCAGAAGCTCTCTGA

Translation (244 aa):
MGTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLGLQLLELPPEESLP
LGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEMGDENATLDGTDVLFTGREFFVGL
SKWTNHRGAEIVADTFRDFAVSTVPVSGSSHLRGLCGMGGPRTVVAGSSEAAQKAVRAMAALTDHPYASL
TLPDDAASDCLFLRPGLPGATPFLLHRGGSAEAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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