NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS58090.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58090.1 Public Homo sapiens 10 CC2D2B 24 110 108 CCDS HistoryNCBI Gene:387707Re-query CCDS DB by CCDS ID:58090.1Re-query CCDS DB by GeneID:387707See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58090.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423344.6 ENSP00000411850.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423344.6Link to Ensembl Protein Viewer:ENSP00000411850.2Re-query CCDS DB by Nucleotide ID:ENST00000423344Re-query CCDS DB by Protein ID:ENSP00000411850
Original member Current member NCBI NM_001130446.3 NP_001123918.2 Accepted alive Link to Nucleotide Sequence:NM_001130446.3Link to Protein Sequence:NP_001123918.2Re-query CCDS DB by Nucleotide ID:NM_001130446Re-query CCDS DB by Protein ID:NP_001123918Link to BLAST:NP_001123918.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123918.2 176 Q6DHV5-4 176 100% 0 0

Chromosomal Locations for CCDS 58090.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 95913426 95913437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95922016 95922076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95924314 95924390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95924779 95924844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95927237 95927332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95937991 95938209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGGAGTGCAGATGTCAGAAGAGATGGATAATATTACAGCTGAAGAAATTATAGACAAGCATCTCCAAA
AAGATTTAGATGCAGAAGAAAATCAAAATGTAGCAAAGACATTGAGAGGCAAAGTGAGAGAAAAGCTAAA
AATTTCTAAGATTAATAAAGGTGAAAAATCTTCAACTGAGCAGCTCATTGATAGCGAAATACATCAAAGG
TCCAAGTTGTCTCCACAGACTGAAGTCTCATTGGATGAAAGTCTTTCATTTTTCATTCTGAGTGGTGAAG
AAGGTTCAGCTTTGGGCAAGTCTTCAGAGCAGAGACCAGTAAACCGTAGTTATCCCAAATGCTTTTCACT
TGGTGTTAATTTACAAAATGTTGCTGAGAGTGAAGAGGAAGAGTTTATGAAAGAATTCATTTTGACAGAT
ATACTCAAAGTAAAAGCTGCTGACTATGAAGATGATCAAGAACAAATAAAAAAACAGAAGGCAAATATTT
TTGTACCAAGTAGTTCTCCAGGTAACATTCTTTCCCAGTAA

Translation (176 aa):
MGVQMSEEMDNITAEEIIDKHLQKDLDAEENQNVAKTLRGKVREKLKISKINKGEKSSTEQLIDSEIHQR
SKLSPQTEVSLDESLSFFILSGEEGSALGKSSEQRPVNRSYPKCFSLGVNLQNVAESEEEEFMKEFILTD
ILKVKAADYEDDQEQIKKQKANIFVPSSSPGNILSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH