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Report for CCDS58215.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58215.1 Public Homo sapiens 12 AEBP2 24 110 108 CCDS HistoryNCBI Gene:121536Re-query CCDS DB by CCDS ID:58215.1Re-query CCDS DB by GeneID:121536See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58215.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360995.8 ENSP00000354267.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360995.8Link to Ensembl Protein Viewer:ENSP00000354267.4Re-query CCDS DB by Nucleotide ID:ENST00000360995Re-query CCDS DB by Protein ID:ENSP00000354267
Original member Current member NCBI NM_001267043.2 NP_001253972.1 Accepted alive Link to Nucleotide Sequence:NM_001267043.2Link to Protein Sequence:NP_001253972.1Re-query CCDS DB by Nucleotide ID:NM_001267043Re-query CCDS DB by Protein ID:NP_001253972Link to BLAST:NP_001253972.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001253972.1 301 Q6ZN18-3 301 100% 0 0

Chromosomal Locations for CCDS 58215.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 19440705 19440727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19462510 19462717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19473248 19473355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19493800 19493986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19500097 19500221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19512398 19512465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19514671 19514784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19518087 19518113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19518675 19518720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGTACACACGTCGGTACTCAAGCATAAGCAGTACTATAATGGATGTAGACAGCACAATTTCCAGTGGGC
GTTCAACTCCAGCAATGATGAATGGACAAGGAAGCACTACTTCTTCAAGCAAAAATATTGCCTATAATTG
TTGTTGGGACCAGTGCCAGGCTTGCTTCAACTCTAGCCCAGATCTGGCAGATCACATCCGTTCCATACAT
GTAGATGGTCAGCGAGGAGGGGTATTTGTTTGCTTATGGAAAGGTTGTAAAGTATATAACACTCCATCTA
CCAGTCAAAGTTGGTTACAAAGGCATATGCTGACACACAGTGGAGACAAACCTTTCAAGTGTGTTGTTGG
TGGCTGCAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGCTCGTCATGTACCCACACACTTCAGTCAGCAG
AACTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGAAGAATCTCCTTCTAAAGCTGGAATGAACAAAA
GGAGGAAATTAAAGAACAAAAGACGACGCTCATTACCACGGCCACATGATTTCTTCGATGCACAAACACT
GGATGCGATAAGACATCGAGCCATATGCTTTAACCTCTCAGCTCATATAGAAAGTTTAGGGAAGGGACAC
AGTGTTGTTTTTCATAGTACTGTAATAGCTAAGAGAAAAGAAGATTCTGGGAAGATCAAACTTTTGCTTC
ATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAATGAAAGTGAACGACATCAGTTAAAAACTAA
AGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCAAACATATACAGAACAATG
CCGCAGAAGAGGTTGAAGAGAACTCTGATAAGAAAAGTGTTCAATTTGTATTTAAGCAAACAGTGA

Translation (301 aa):
MYTRRYSSISSTIMDVDSTISSGRSTPAMMNGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLADHIRSIH
VDGQRGGVFVCLWKGCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPTHFSQQ
NSSKVSSQPKAKEESPSKAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIESLGKGH
SVVFHSTVIAKRKEDSGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKLPKDTALLLDPNIYRTM
PQKRLKRTLIRKVFNLYLSKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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