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Report for CCDS58637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58637.1 Public Homo sapiens 19 ARHGAP45 24 110 108 CCDS HistoryNCBI Gene:23526Re-query CCDS DB by CCDS ID:58637.1Re-query CCDS DB by GeneID:23526See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58637.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539243.6 ENSP00000439601.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539243.6Link to Ensembl Protein Viewer:ENSP00000439601.1Re-query CCDS DB by Nucleotide ID:ENST00000539243Re-query CCDS DB by Protein ID:ENSP00000439601
Original member Current member NCBI NM_001258328.4 NP_001245257.1 Accepted alive Link to Nucleotide Sequence:NM_001258328.4Link to Protein Sequence:NP_001245257.1Re-query CCDS DB by Nucleotide ID:NM_001258328Re-query CCDS DB by Protein ID:NP_001245257Link to BLAST:NP_001245257.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001245257.1 1152 Q92619-2 1152 100% 0 0

Chromosomal Locations for CCDS 58637.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1066026 1066163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1068414 1068744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1073149 1073292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1073506 1073590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1073674 1073746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1073948 1074014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1074104 1074241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1074343 1074407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1074614 1074724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1074799 1074879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1077857 1078045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1079703 1079840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1079928 1080118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1080255 1080379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1080464 1080547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1080682 1080786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1080892 1081064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1081550 1081738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1081824 1081961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1082840 1083066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1083143 1083353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1084238 1084346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1085660 1086006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3459 nt):
ATGAGTCGGGGGCAAAGAGTTCTCAAGGGTCTGCTGGGCTGGGTTTGCACTTGGACCTGGGCCTGGAGAG
CCAGACTTGGAGCAAGGGGCTGTGGCCTTCATGTCCTGTGCCCCAGAGATCTGCCCCTCCCACCCGAGGA
GCTGCCCAGGAAGGATGGGGCTGACGCGGTGTTCCCCGGACCAAGCCTGGAGCCGCCCGCTGGGTCCTCC
GGCGTCAAGGCCACAGGGACCCTCAAGCGGCCCACCAGCCTGAGCCGCCACGCCAGCGCGGCTGGCTTCC
CCCTGTCGGGTGCTGCCTCCTGGACACTGGGCCGGAGCCACCGGAGCCCACTGACAGCCGCCAGCCCGGG
CGAGCTGCCCACCGAGGGTGCCGGCCCGGACGTCGTCGAGGACATCTCCCATCTGCTGGCGGACGTGGCC
CGCTTCGCTGAGGGCCTTGAGAAACTTAAGGAGTGTGTGTTGCGTGACGACCTCCTTGAGGCCCGCCGCC
CGCGGGCCCACGAGTGCCTGGGTGAGGCTCTGCGTGTCATGCATCAGATCATCTCCAAGTACCCGCTGCT
GAACACCGTGGAGACGCTCACCGCAGCCGGCACCCTCATTGCCAAGGTCAAAGCCTTCCATTATGAGAGC
AACAATGATCTGGAGAAACAGGAGTTCGAGAAGGCCCTGGAGACGATTGCTGTGGCCTTCAGTAGCACAG
TGTCCGAGTTCCTCATGGGTGAAGTGGACAGCAGCACCCTCCTAGCAGTGCCTCCTGGGGACTCGAGCCA
GTCCATGGAAAGCCTGTATGGACCGGGCAGTGAGGGCACGCCTCCCAGCCTGGAAGACTGTGACGCCGGC
TGCCTGCCCGCCGAGGAGGTGGACGTGCTGCTACAGCGCTGTGAGGGGGGCGTGGATGCCGCACTGCTGT
ATGCCAAGAACATGGCCAAGTACATGAAGGACCTCATCAGCTACCTGGAGAAGCGGACGACGCTGGAGAT
GGAGTTTGCCAAGGGCCTGCAGAAGATCGCTCACAACTGCAGACAGAGCGTCATGCAGGAGCCCCACATG
CCGCTCCTGTCCATCTACTCGCTGGCCCTGGAGCAGGACCTGGAGTTCGGCCACAGCATGGTGCAGGCGG
TGGGCACCTTGCAGACCCAGACCTTCATGCAGCCCCTGACCCTGCGGCGGCTTGAACACGAGAAGCGCAG
GAAGGAGATCAAGGAGGCCTGGCACCGTGCCCAGAGGAAGCTGCAAGAGGCGGAGTCCAACCTGCGCAAG
GCCAAGCAGGGTTACGTGCAGCGCTGCGAGGACCACGACAAGGCTCGCTTCCTCGTGGCCAAGGCGGAGG
AGGAGCAGGCTGGCAGCGCGCCGGGAGCAGGCAGCACGGCCACCAAGACCCTGGACAAGCGGCGGCGGCT
GGAGGAGGAGGCCAAGAACAAGGCGGAGGAAGCTATGGCCACCTACCGCACCTGCGTGGCCGACGCGAAG
ACGCAGAAGCAGGAGCTGGAGGATACCAAGGTGACGGCGCTGCGGCAGATCCAGGAGGTCATCCGGCAGA
GCGACCAAACCATCAAGTCGGCCACGATCTCCTACTACCAGATGATGCATATGCAGACGGCGCCGCTGCC
CGTGCACTTCCAGATGCTGTGTGAGAGCAGCAAGCTGTATGACCCAGGCCAGCAGTACGCCTCCCACGTG
CGCCAGCTGCAGCGGGACCAGGAGCCCGATGTGCACTACGACTTTGAGCCCCACGTCTCCGCCAACGCCT
GGTCCCCCGTCATGCGTGCCCGGAAGAGCAGCTTCAACGTGAGTGATGTGGCGCGGCCGGAGGCTGCCGG
GAGCCCCCCAGAAGAAGGCGGGTGCACTGAGGGCACACCTGCCAAGGACCACAGGGCCGGGCGAGGACAC
CAGGTTCACAAGTCATGGCCGCTCTCGATCTCAGACTCGGACAGTGGGCTGGACCCCGGCCCTGGCGCAG
GGGACTTTAAGAAGTTCGAGCGGACGTCATCCAGTGGTACCATGTCGTCCACGGAGGAGCTGGTGGACCC
AGACGGTGGAGCCGGGGCTTCAGCCTTTGAGCAGGCTGACCTCAACGGCATGACCCCCGAGCTGCCGGTG
GCCGTGCCCAGTGGACCGTTCCGCCACGAGGGGCTGTCCAAGGCGGCCCGTACTCACCGGCTCCGGAAGC
TCCGCACGCCCGCCAAGTGCCGCGAGTGCAACAGCTACGTCTACTTCCAGGGTGCTGAGTGTGAAGAGTG
CTGCCTGGCCTGCCACAAGAAATGTCTGGAGACGCTGGCCATACAGTGCGGGCACAAGAAGCTGCAAGGC
CGCCTGCAGCTGTTCGGCCAGGACTTCAGCCACGCGGCCCGCAGCGCCCCCGACGGCGTGCCCTTCATCG
TCAAGAAGTGCGTCTGCGAGATCGAGCGGCGGGCGCTGCGCACCAAGGGCATCTACCGGGTCAATGGGGT
AAAGACACGCGTGGAGAAGCTGTGCCAGGCCTTCGAGAACGGCAAGGAGCTGGTCGAGCTGTCGCAGGCC
TCGCCCCACGACATCAGCAACGTCCTCAAGCTCTACCTGCGTCAGCTTCCCGAGCCGCTCATCTCCTTCC
GCCTCTACCACGAGCTCGTAGGGCTGGCCAAGGACAGCCTGAAGGCAGAGGCCGAGGCCAAGGCGGCGTC
CCGGGGCCGGCAGGACGGCTCGGAGAGCGAGGCAGTGGCGGTGGCCCTGGCAGGTCGGCTGCGGGAGCTC
CTGCGGGACCTGCCGCCTGAGAACCGGGCCTCGCTGCAGTACCTGCTGCGTCACCTACGCAGGATCGTGG
AGGTGGAGCAGGACAACAAGATGACCCCCGGGAACCTGGGCATCGTGTTCGGGCCCACGCTGCTTCGGCC
ACGGCCCACCGAGGCCACCGTGTCCCTCTCCTCCCTGGTGGATTATCCCCATCAGGCCCGCGTCATCGAG
ACTCTCATCGTCCACTACGGCCTGGTCTTCGAGGAGGAGCCGGAGGAGACCCCCGGGGGCCAGGACGAGT
CATCCAACCAGCGAGCTGAGGTAGTCGTCCAGGTGCCGTACCTGGAGGCGGGCGAGGCGGTGGTCTACCC
GCTGCAGGAGGCGGCGGCGGACGGGTGCAGAGAATCCCGAGTTGTGTCCAACGATTCGGACTCGGACCTA
GAGGAGGCCTCCGAGCTGCTGTCCTCATCGGAGGCCAGTGCCCTGGGCCACCTCAGCTTCCTGGAGCAGC
AGCAGAGCGAGGCCAGCCTAGAGGTGGCTTCTGGCAGCCACAGCGGCAGTGAGGAGCAGCTGGAGGCCAC
AGCCCGGGAGGACGGGGACGGGGACGAGGACGGCCCGGCCCAGCAGCTCTCAGGATTCAACACCAACCAG
TCCAACAACGTGCTGCAGGCCCCACTGCCCCCCATGAGGCTCCGTGGCGGGCGGATGACACTGGGCTCCT
GCAGGGAAAGGCAGCCGGAATTCGTGTGA

Translation (1152 aa):
MSRGQRVLKGLLGWVCTWTWAWRARLGARGCGLHVLCPRDLPLPPEELPRKDGADAVFPGPSLEPPAGSS
GVKATGTLKRPTSLSRHASAAGFPLSGAASWTLGRSHRSPLTAASPGELPTEGAGPDVVEDISHLLADVA
RFAEGLEKLKECVLRDDLLEARRPRAHECLGEALRVMHQIISKYPLLNTVETLTAAGTLIAKVKAFHYES
NNDLEKQEFEKALETIAVAFSSTVSEFLMGEVDSSTLLAVPPGDSSQSMESLYGPGSEGTPPSLEDCDAG
CLPAEEVDVLLQRCEGGVDAALLYAKNMAKYMKDLISYLEKRTTLEMEFAKGLQKIAHNCRQSVMQEPHM
PLLSIYSLALEQDLEFGHSMVQAVGTLQTQTFMQPLTLRRLEHEKRRKEIKEAWHRAQRKLQEAESNLRK
AKQGYVQRCEDHDKARFLVAKAEEEQAGSAPGAGSTATKTLDKRRRLEEEAKNKAEEAMATYRTCVADAK
TQKQELEDTKVTALRQIQEVIRQSDQTIKSATISYYQMMHMQTAPLPVHFQMLCESSKLYDPGQQYASHV
RQLQRDQEPDVHYDFEPHVSANAWSPVMRARKSSFNVSDVARPEAAGSPPEEGGCTEGTPAKDHRAGRGH
QVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGGAGASAFEQADLNGMTPELPV
AVPSGPFRHEGLSKAARTHRLRKLRTPAKCRECNSYVYFQGAECEECCLACHKKCLETLAIQCGHKKLQG
RLQLFGQDFSHAARSAPDGVPFIVKKCVCEIERRALRTKGIYRVNGVKTRVEKLCQAFENGKELVELSQA
SPHDISNVLKLYLRQLPEPLISFRLYHELVGLAKDSLKAEAEAKAASRGRQDGSESEAVAVALAGRLREL
LRDLPPENRASLQYLLRHLRRIVEVEQDNKMTPGNLGIVFGPTLLRPRPTEATVSLSSLVDYPHQARVIE
TLIVHYGLVFEEEPEETPGGQDESSNQRAEVVVQVPYLEAGEAVVYPLQEAAADGCRESRVVSNDSDSDL
EEASELLSSSEASALGHLSFLEQQQSEASLEVASGSHSGSEEQLEATAREDGDGDEDGPAQQLSGFNTNQ
SNNVLQAPLPPMRLRGGRMTLGSCRERQPEFV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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