NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS59238.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59238.1 Public Homo sapiens 12 ZNF891 24 110 108 CCDS HistoryNCBI Gene:101060200Re-query CCDS DB by CCDS ID:59238.1Re-query CCDS DB by GeneID:101060200See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59238.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537226.3 ENSP00000437590.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000537226.3Link to Ensembl Protein Viewer:ENSP00000437590.1Re-query CCDS DB by Nucleotide ID:ENST00000537226Re-query CCDS DB by Protein ID:ENSP00000437590
Original member Current member NCBI NM_001277291.2 NP_001264220.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001277291.2Link to Protein Sequence:NP_001264220.1Re-query CCDS DB by Nucleotide ID:NM_001277291Re-query CCDS DB by Protein ID:NP_001264220Link to BLAST:NP_001264220.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001264220.1 544 A8MT65 544 100% 0 0

Chromosomal Locations for CCDS 59238.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 133120284 133121918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGGCAGTTATGGACCTATCCTCCCCATGGGCTTTAACTAAACAGGACTCTGCCTGTTTCCATCTGAGAA
ATGCTGAAGAGGAAAGGATGATTGCTGTATTTCTGACAACCTGGTTACAGGAACCAATGACTTTCAAAGA
TGTAGCTGTGGAGTTCACTCAGGAGGAGTGGATGATGCTGGATTCTGCTCAAAGAAGTCTGTACAGAGAT
GTGATGTTGGAAAACTATAGAAATCTCACCTCCGTGGAATATCAGTTGTACAGGCTTACTGTGATCTCCC
CATTGGATCAAGAAGAGATAAGGAATATGAAAAAGAGAATTCCCCAAGCCATCTGTCCAGACCAGAAGAT
TCAACCTAAAACCAAAGAATCAACTGTGCAGAAAATTTTGTGGGAGGAACCATCCAATGCAGTGAAAATG
ATAAAACTCACAATGCATAATTGGTCCTCCACATTAAGAGAAGACTGGGAATGCCATAAGATCAGAAAAC
AGCATAAGATTCCAGGGGGACATTGGAGGCAAATGATATATGCCCCAAAGAAAACAGTACCTCAGGAGCT
ATTCCGTGACTATCATGAATTAGAGGAAAACTCTAAACTTGGATCAAAACTTATTTTTTCACAGAGCATT
TTCACCAGTAAACATTGCCAAAAATGTTACTCAGAGATTGGATGTTTGAAACACAATTCAATCATAAACA
ATTATGTGAAAAACTCTATAAGTGAGAAGCTCTATGAAAGTCATGAATGTGATACAACTCTATGGCATTT
TCAGAGAAATCAAACAGTACAAAAAGAGTACACATATTCTAAACATGGAATGCACTTCACACATAATATG
TTTCCTGTACCTAACAATTTGCATATGGCACAGAATGCCTGTGAATGTAATAAAGATGAAACGCTGTGTC
ATCAATCATCCCTTAAGAAACAAGGACAAACTCATACTGAAAAGAAACATGAATGCAATCAATGTGGAAA
AGCCTTCAAAAGGATTTCTAATCTTACTTTATACAAGAAAAGTCACATGGGTGAGAAACAATATGAATGT
AAAGAATGTGGTAAAGTGTTCAATGATTCCTCAACCTTAAGGAGACATGTAAGAACTCACACTGGAGAGA
AACCCTATGAATGTAATCAATGTGGAAAAGCTTTCAGTCAAAAAACATCCCTTAAGGCTCACATGAGAAC
TCACACTGGAGAGAAACCTTATGAATGTAATCAGTGTGGAAAATCCTTTGGCACAAGCTCTTACCTTATA
GTGCACAAGAGAATACACACTGGAGAAAAACTCTATGAATGCAGTGAGTGTGGAAAAGCCTTCAACACGA
GCTCTCACCTTAAAGTTCATAAGAAAATTCATACCGGAGAGAATGTTTATGAATGCAGTGACTGTGGGAA
AGTTTTCAGTGGGGTCTCATCCCTTAGAATGCATATAAGAACTCACACTGGAGAGAAACCCTATGAATGT
AAGGAATGTAGGAAAGCCTTCAGTGTTTCCTCTTCCCTTAGGAGGCATGTGAGAATTCACACTGGAGAGA
AACCCTATGAATGTATTCAATGTGGAAAAGCCTTCAGTCAGAGCTCTTCACTTATTATACACAAGAGAAT
TCATACTGAGAGAGAAACCCTGTAA

Translation (544 aa):
MAVMDLSSPWALTKQDSACFHLRNAEEERMIAVFLTTWLQEPMTFKDVAVEFTQEEWMMLDSAQRSLYRD
VMLENYRNLTSVEYQLYRLTVISPLDQEEIRNMKKRIPQAICPDQKIQPKTKESTVQKILWEEPSNAVKM
IKLTMHNWSSTLREDWECHKIRKQHKIPGGHWRQMIYAPKKTVPQELFRDYHELEENSKLGSKLIFSQSI
FTSKHCQKCYSEIGCLKHNSIINNYVKNSISEKLYESHECDTTLWHFQRNQTVQKEYTYSKHGMHFTHNM
FPVPNNLHMAQNACECNKDETLCHQSSLKKQGQTHTEKKHECNQCGKAFKRISNLTLYKKSHMGEKQYEC
KECGKVFNDSSTLRRHVRTHTGEKPYECNQCGKAFSQKTSLKAHMRTHTGEKPYECNQCGKSFGTSSYLI
VHKRIHTGEKLYECSECGKAFNTSSHLKVHKKIHTGENVYECSDCGKVFSGVSSLRMHIRTHTGEKPYEC
KECRKAFSVSSSLRRHVRIHTGEKPYECIQCGKAFSQSSSLIIHKRIHTERETL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH