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Report for CCDS59283.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59283.1 Public Homo sapiens 17 MYO19 24 110 108 CCDS HistoryNCBI Gene:80179Re-query CCDS DB by CCDS ID:59283.1Re-query CCDS DB by GeneID:80179See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59283.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621344.4 ENSP00000477559.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000621344.4Link to Ensembl Protein Viewer:ENSP00000477559.1Re-query CCDS DB by Nucleotide ID:ENST00000621344Re-query CCDS DB by Protein ID:ENSP00000477559
Original member Current member NCBI NM_001033580.3 NP_001028752.1 Accepted alive Link to Nucleotide Sequence:NM_001033580.3Link to Protein Sequence:NP_001028752.1Re-query CCDS DB by Nucleotide ID:NM_001033580Re-query CCDS DB by Protein ID:NP_001028752Link to BLAST:NP_001028752.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028752.1 317 Q96H55-2 317 100% 0 0

Chromosomal Locations for CCDS 59283.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 36513369 36513505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36513629 36513725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36514446 36514548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36515113 36515182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36515858 36515990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36525228 36525341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36527551 36527699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36528064 36528202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 36532527 36532538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGCTCCAGCAGGTCAATGGCCACAATCCGGGGTCTGATGGCCAAGCCAGGGAGTACCTCAGAGAAGACC
TGCAGGAGTTCCTGGGTGGGGAGGTCCTGCTGTACAAACTGGATGACCTCACCAGGGTGAATCCTGTGAC
ACTAGAGACAGTCCTGAGGTGCCTGCAGGCCCGGTACATGGCAGACACATTCTACACCAATGCTGGCTGC
ACCCTGGTAGCCTTGAACCCCTTCAAGCCTGTTCCTCAGCTCTACTCGCCCGAGCTAATGAGAGAGTACC
ATGCTGCGCCTCAGCCCCAGAAACTGAAGCCCCATGTGTTCACTGTGGGTGAACAGACCTACAGGAATGT
CAAGAGCCTGATTGAACCAGTCAACCAGTCTATTGTTGTCAGTGGAGAGAGTGGTGCTGGAAAGACATGG
ACGTCTCGCTGCCTAATGAAGTTCTATGCTGTGGTGGCCACCTCACCTGCATCTTGGGAGAGCCACAAGA
TTGCAGAGAGGATAGAACAGAGGATCCTGAACTCCAACCCTGTCATGGAAGCTTTTGGGAATGCGTGTAC
ACTGAGGAATAACAACAGCAGTCGCTTTGGGAAGTTCATCCAGCTCCAGCTGAACAGGGCTCAGCAAATG
ACTGGAGCCGCAGTCCAGACCTACCTCCTAGAGAAAACTCGAGTGGCCTGCCAGGCTTCCAGTGAGAGGA
ACTTCCACATCTTCTATCAGATTTGCAAAGGAGCCAGTGAGGACGAGAGGCTCCAGTGGCACCTTCCTGA
GGGAGCTGCCTTCTCCTGGCTGCCCAACCCAGAGAGGAGCTTAGAAGAGGATTGTTTTGAGGTGACCAGA
GAGGCCATGCTCCATTTGGGCATTGACACCCCTACCCAGAACAACATCTTTAAGGTCAGAAGAAAAGCCA
CGCCACTTAAGTTTGGCAGAGATGACGGGCAGCCCTTTGCATAG

Translation (317 aa):
MLQQVNGHNPGSDGQAREYLREDLQEFLGGEVLLYKLDDLTRVNPVTLETVLRCLQARYMADTFYTNAGC
TLVALNPFKPVPQLYSPELMREYHAAPQPQKLKPHVFTVGEQTYRNVKSLIEPVNQSIVVSGESGAGKTW
TSRCLMKFYAVVATSPASWESHKIAERIEQRILNSNPVMEAFGNACTLRNNNSSRFGKFIQLQLNRAQQM
TGAAVQTYLLEKTRVACQASSERNFHIFYQICKGASEDERLQWHLPEGAAFSWLPNPERSLEEDCFEVTR
EAMLHLGIDTPTQNNIFKVRRKATPLKFGRDDGQPFA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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