NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS59298.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59298.1 Public Homo sapiens 17 METTL23 24 110 108 CCDS HistoryNCBI Gene:124512Re-query CCDS DB by CCDS ID:59298.1Re-query CCDS DB by GeneID:124512See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59298.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000588822.1 ENSP00000465430.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588822.1Link to Ensembl Protein Viewer:ENSP00000465430.1Re-query CCDS DB by Nucleotide ID:ENST00000588822Re-query CCDS DB by Protein ID:ENSP00000465430
Original member Current member EBI ENST00000590964.5 ENSP00000465890.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590964.5Link to Ensembl Protein Viewer:ENSP00000465890.1Re-query CCDS DB by Nucleotide ID:ENST00000590964Re-query CCDS DB by Protein ID:ENSP00000465890
Original member Current member EBI ENST00000586752.5 ENSP00000466203.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000586752.5Link to Ensembl Protein Viewer:ENSP00000466203.1Re-query CCDS DB by Nucleotide ID:ENST00000586752Re-query CCDS DB by Protein ID:ENSP00000466203
Original member Current member NCBI NM_001206985.3 NP_001193914.1 Accepted alive Link to Nucleotide Sequence:NM_001206985.3Link to Protein Sequence:NP_001193914.1Re-query CCDS DB by Nucleotide ID:NM_001206985Re-query CCDS DB by Protein ID:NP_001193914Link to BLAST:NP_001193914.1
Original member Current member NCBI NM_001206986.3 NP_001193915.1 Accepted alive Link to Nucleotide Sequence:NM_001206986.3Link to Protein Sequence:NP_001193915.1Re-query CCDS DB by Nucleotide ID:NM_001206986Re-query CCDS DB by Protein ID:NP_001193915Link to BLAST:NP_001193915.1
Original member Current member NCBI NM_001206987.3 NP_001193916.1 Accepted alive Link to Nucleotide Sequence:NM_001206987.3Link to Protein Sequence:NP_001193916.1Re-query CCDS DB by Nucleotide ID:NM_001206987Re-query CCDS DB by Protein ID:NP_001193916Link to BLAST:NP_001193916.1
Original member Current member NCBI NM_001302704.2 NP_001289633.1 Accepted alive Link to Nucleotide Sequence:NM_001302704.2Link to Protein Sequence:NP_001289633.1Re-query CCDS DB by Nucleotide ID:NM_001302704Re-query CCDS DB by Protein ID:NP_001289633Link to BLAST:NP_001289633.1
Original member Current member NCBI NM_001378354.1 NP_001365283.1 Accepted alive Link to Nucleotide Sequence:NM_001378354.1Link to Protein Sequence:NP_001365283.1Re-query CCDS DB by Nucleotide ID:NM_001378354Re-query CCDS DB by Protein ID:NP_001365283Link to BLAST:NP_001365283.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193914.1 123 Q86XA0-2 123 100% 0 0
NP_001193915.1 123 Q86XA0-2 123 100% 0 0
NP_001193916.1 123 Q86XA0-2 123 100% 0 0
NP_001289633.1 123 Q86XA0-2 123 100% 0 0
NP_001365283.1 123 Q86XA0-2 123 100% 0 0

Chromosomal Locations for CCDS 59298.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 76733095 76733215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76733293 76733377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76733521 76733686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (372 nt):
ATGAATAACCTGCCACATCTGCAGGTGGTAGGACTAACATGGGGTCATATATCTTGGGATCTTCTGGCTC
TACCACCACAAGATATTATCCTTGCATCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGACATTTTGGC
TACAATATATTTTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGTCTACTTATCAAGTTAGGAGTGCT
GACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAATGTGTCCACATTCCTCTTGAGTCTTTTG
ATGCAGACAAAGAAGATATAGCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTC
CTTTGCAAAGGACAGTCTCTGA

Translation (123 aa):
MNNLPHLQVVGLTWGHISWDLLALPPQDIILASDVFFEPEDFEDILATIYFLMHKNPKVQLWSTYQVRSA
DWSLEALLYKWDMKCVHIPLESFDADKEDIAESTLPGRHTVEMLVISFAKDSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH