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Report for CCDS60499.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60499.1 Public Homo sapiens 10 ARMC3 24 110 108 CCDS HistoryNCBI Gene:219681Re-query CCDS DB by CCDS ID:60499.1Re-query CCDS DB by GeneID:219681See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60499.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409049.7 ENSP00000387288.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409049.7Link to Ensembl Protein Viewer:ENSP00000387288.3Re-query CCDS DB by Nucleotide ID:ENST00000409049Re-query CCDS DB by Protein ID:ENSP00000387288
Original member Current member NCBI NM_001282746.2 NP_001269675.1 Accepted alive Link to Nucleotide Sequence:NM_001282746.2Link to Protein Sequence:NP_001269675.1Re-query CCDS DB by Nucleotide ID:NM_001282746Re-query CCDS DB by Protein ID:NP_001269675Link to BLAST:NP_001269675.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269675.1 688 Q5W041-3 688 100% 0 0

Chromosomal Locations for CCDS 60499.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 22931997 22932044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22946144 22946261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22955807 22955932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22959070 22959138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22959399 22959574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22961884 22962078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22968306 22968489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22981340 22981492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22981595 22981700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22998148 22998397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23001919 23002055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23003246 23003414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23006884 23006981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23008276 23008374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23008815 23008931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23014100 23014121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2067 nt):
ATGGGTAAAAAGATAAAGAAGGAAGTAGAGCCTCCTCCTAAGGATGTGTTTGACCCATTAATGATTGAAA
GCAAAAAAGCAGCAACTGTGGTGTTAATGCTTAATTCTCCAGAAGAGGAAATTTTGGCTAAAGCATGTGA
AGCCATTTATAAATTTGCTTTAAAAGGTGAGGAAAATAAAACAACCCTCCTTGAACTTGGAGCTGTGGAA
CCTTTAACTAAGCTACTCACCCATGAAGACAAAATTGTAAGAAGAAATGCTACTATGATATTTGGAATCC
TGGCTTCTAATAATGATGTTAAAAAATTGTTAAGGGAGTTAGATGTCATGAATTCTGTCATTGCCCAGCT
CGCTCCAGAAGAAGAAGTAGTTATCCATGAGTTTGCTAGTCTTTGTCTAGCAAACATGTCTGCAGAGTAC
ACCAGTAAAGTGCAAATATTTGAACATGGGGGATTAGAGCCACTCATCAGACTACTGAGTAGCCCTGACC
CGGATGTAAAGAAGAACTCTATGGAATGCATTTACAACTTGGTGCAGGATTTTCAGTGTCGAGCTAAACT
TCAAGAACTAAATGCAATACCTCCTATCTTAGATCTCTTGAAGTCAGAATATCCAGTGATTCAGTTGTTG
GCTCTCAAAACCTTAGGTGTTATTGCAAATGATAAGGAGTCTCGAACAATGCTAAGAGACAATCAAGGAT
TGGACCATCTTATTAAGATCCTAGAAACTAAGGAATTGAATGACCTTCATATAGAAGCACTTGCAGTGAT
AGCCAATTGCCTTGAAGACATGGATACTATGGTGCAGATTCAGCAGACAGGGGGTCTTAAAAAGCTCCTG
TCATTTGCAGAAAACTCTACAATTCCTGATATTCAGAAGAATGCAGCAAAAGCCATTACTAAAGCAGCTT
ATGATCCTGAAAATAGAAAACTTTTTCATGAACAAGAGGTTGAAAAGTGCCTTGTAGCCCTTTTGGGTTC
TGAAAATGATGGAACTAAAATTGCTGCTTCCCAAGCTATTTCAGCAATGTGTGAGAATTCAGGCAGCAAA
GATTTTTTCAATAATCAGGGGATTCCACAGTTAATTCAGTTGCTAAAAAGTGACAATGAAGAGGTACGGG
AAGCAGCAGCTCTAGCCCTGGCAAACCTAACCACTTGCAACCCTGCTAATGCAAACGCTGCTGCTGAAGC
TGATGGTATTGATCCATTAATAAACCTCCTGTCTAGTAAACGAGATGGAGCCATTGCCAACGCTGCTACA
GTATTAACAAACATGGCCATGCAGGAGCCCCTGCGCCTGAACATACAGAATCACGACATCATGCATGCCA
TCATCAGCCCACTGCGTTCTGCAAACACAGTCGTGCAGAGCAAAGCTGCTCTCGCTGTCACCGCAACTGC
GTGTGACGTTGAAGCCCGGACTGAGTTAAGAAATTCTGGTGGATTGGAGCCCCTGGTAGAGCTGCTACGC
TCCAAGAATGATGAAGTGAGGAAGCACGCCAGTTGGGCAGTGATGGTCTGTGCTGGTGACGAGCTGACGG
CCAATGAATTATGCAGGCTCGGGGCTTTAGATATCCTTGAAGAAGTTAACGTATCAGGAACTCGGAAAAA
TAAATTCAGTGAGGCAGCTTATAATAAGTTGCTCAATAACAATCTTTCCCTGAAATACAGCCAGACTGGC
TATTTGTCATCAAGTAACATAATTAACGATGGATTCTATGATTATGGTCGGATAAATCCCGGCACCAAAC
TGTTGCCTTTGAAGGAGCTCTGCTTACAAGAACCAAGTGACCTACGGGCTGTACTCTTAATCAACAGTAA
ATCTTACGTTTCTCCACCTTCATCTATGGAAGATAAATCAGATGTTGGTTATGGACGAAGTATTTCTTCT
TCATCTTCCTTAAGAAGATCAAGTAAAGAAAAGAACAAAAAAAATAGTTATCATTTTAGTGCTGGATTTG
GATCTCCCATAGAAGACAAATCAGAGCCAGCTTCTGGACGAAATACTGTTCTCAGCAAAAGCGCCACCAA
AGAAAAAGGATGGAGCTCACTCCCCACTTCAAGATAA

Translation (688 aa):
MGKKIKKEVEPPPKDVFDPLMIESKKAATVVLMLNSPEEEILAKACEAIYKFALKGEENKTTLLELGAVE
PLTKLLTHEDKIVRRNATMIFGILASNNDVKKLLRELDVMNSVIAQLAPEEEVVIHEFASLCLANMSAEY
TSKVQIFEHGGLEPLIRLLSSPDPDVKKNSMECIYNLVQDFQCRAKLQELNAIPPILDLLKSEYPVIQLL
ALKTLGVIANDKESRTMLRDNQGLDHLIKILETKELNDLHIEALAVIANCLEDMDTMVQIQQTGGLKKLL
SFAENSTIPDIQKNAAKAITKAAYDPENRKLFHEQEVEKCLVALLGSENDGTKIAASQAISAMCENSGSK
DFFNNQGIPQLIQLLKSDNEEVREAAALALANLTTCNPANANAAAEADGIDPLINLLSSKRDGAIANAAT
VLTNMAMQEPLRLNIQNHDIMHAIISPLRSANTVVQSKAALAVTATACDVEARTELRNSGGLEPLVELLR
SKNDEVRKHASWAVMVCAGDELTANELCRLGALDILEEVNVSGTRKNKFSEAAYNKLLNNNLSLKYSQTG
YLSSSNIINDGFYDYGRINPGTKLLPLKELCLQEPSDLRAVLLINSKSYVSPPSSMEDKSDVGYGRSISS
SSSLRRSSKEKNKKNSYHFSAGFGSPIEDKSEPASGRNTVLSKSATKEKGWSSLPTSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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