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Report for CCDS61480.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61480.1 Public Homo sapiens 14 DCAF5 24 110 108 CCDS HistoryNCBI Gene:8816Re-query CCDS DB by CCDS ID:61480.1Re-query CCDS DB by GeneID:8816See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61480.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000554215.5 ENSP00000451551.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554215.5Link to Ensembl Protein Viewer:ENSP00000451551.1Re-query CCDS DB by Nucleotide ID:ENST00000554215Re-query CCDS DB by Protein ID:ENSP00000451551
Original member Current member EBI ENST00000556847.5 ENSP00000452052.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000556847.5Link to Ensembl Protein Viewer:ENSP00000452052.1Re-query CCDS DB by Nucleotide ID:ENST00000556847Re-query CCDS DB by Protein ID:ENSP00000452052
Original member Current member NCBI NM_001284207.1 NP_001271136.1 Accepted alive Link to Nucleotide Sequence:NM_001284207.1Link to Protein Sequence:NP_001271136.1Re-query CCDS DB by Nucleotide ID:NM_001284207Re-query CCDS DB by Protein ID:NP_001271136Link to BLAST:NP_001271136.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271136.1 860 Q96JK2-2 860 100% 0 0

Chromosomal Locations for CCDS 61480.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 69053857 69055611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69062384 69062511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69075345 69075411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69091674 69091887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69116366 69116495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69118139 69118278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69119194 69119230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69122217 69122328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2583 nt):
ATGGAACAAGCCATCCACTCCAGGGTCAAGCCCATACAGCTGAAAGGAGAGCACCATTCCAACATTTTTT
GCCTGGCTTTCAACAGTGGGAACACTAAAGTGTTCTCTGGAGGCAATGATGAGCAAGTTATCCTCCATGA
TGTTGAAAGCAGTGAGACATTGGACGTGTTTGCTCATGAAGATGCAGTATATGGCTTGTCTGTGAGCCCA
GTGAATGACAACATTTTTGCCAGTTCCTCAGATGATGGCCGGGTTCTCATTTGGGACATTCGGGAATCCC
CCCATGGAGAGCCCTTCTGCCTGGCAAACTATCCATCAGCCTTTCATAGTGTCATGTTTAACCCTGTGGA
GCCCAGGTTGTTGGCCACAGCCAATTCAAAGGAAGGAGTGGGACTCTGGGACATTCGAAAACCTCAGAGT
TCTCTCCTGCGCTATGGTGGAAACCTGTCCCTCCAAAGTGCCATGAGTGTACGATTCAACAGCAACGGGA
CCCAGCTCCTGGCCCTGAGGCGACGCCTGCCCCCTGTGCTCTATGACATCCATTCCCGCCTGCCTGTGTT
TCAGTTTGACAATCAGGGTTACTTCAACTCATGCACCATGAAAAGCTGCTGTTTTGCAGGAGATCGTGAC
CAGTATATCCTTTCGGGCTCTGATGACTTCAACCTGTACATGTGGAGAATTCCTGCAGATCCAGAAGCAG
GTGGCATTGGTAGGGTGGTCAACGGAGCCTTCATGGTGCTGAAAGGGCATCGATCTATTGTTAACCAAGT
CCGATTTAATCCCCACACCTACATGATCTGCTCTTCTGGTGTAGAAAAGATTATCAAGATCTGGAGCCCA
TACAAGCAGCCAGGATGTACTGGAGACCTCGACGGTCGGATTGAGGACGATTCCCGCTGCCTCTATACCC
ATGAAGAGTACATCAGCCTTGTGCTGAACAGTGGGAGTGGCCTGTCGCATGACTACGCCAACCAGTCGGT
CCAGGAAGACCCCCGGATGATGGCCTTCTTTGACTCACTGGTACGCCGAGAGATCGAGGGCTGGAGCTCT
GACTCAGACAGTGACCTCAGTGAGAGTACTATCCTCCAACTGCACGCTGGGGTCAGCGAGCGCTCAGGCT
ACACTGACTCAGAGTCTTCGGCCTCATTGCCTCGCTCCCCGCCTCCCACAGTAGATGAGTCTGCCGACAA
CGCCTTCCACCTGGGGCCCCTGCGGGTCACCACCACAAACACAGTAGCCTCAACTCCACCAACACCCACG
TGTGAGGATGCAGCCTCTCGCCAGCAGCGTCTGTCTGCTCTGCGGCGCTACCAAGACAAACGCCTCCTGG
CCCTTTCCAATGAGTCCGATTCTGAGGAGAATGTCTGTGAGGTGGAACTAGACACAGATCTCTTTCCCCG
GCCACGGTCACCCAGCCCCGAAGATGAATCCAGCAGTTCCAGCAGCTCTAGCAGCTCTGAGGATGAGGAG
GAGCTGAATGAACGCCGAGCCTCTACCTGGCAGCGGAATGCCATGCGGCGCCGACAGAAGACAACCCGAG
AAGACAAGCCCAGTGCCCCAATCAAGCCCACCAACACTTACATTGGAGAAGACAACTATGATTACCCCCA
GATCAAAGTGGATGACCTCTCCTCCTCCCCAACCTCGTCCCCTGAGCGGAGCACTTCCACGCTAGAGATT
CAACCAAGCCGGGCATCACCAACTTCTGACATAGAATCAGTTGAGCGAAAAATTTATAAAGCTTACAAGT
GGCTCCGCTACTCTTATATCTCCTACTCAAATAACAAAGATGGAGAGACCTCCTTGGTGACCGGGGAGGC
AGATGAAGGGAGAGCAGGAACCAGCCACAAAGACAACCCAGCCCCTTCTTCCAGTAAGGAAGCCTGTCTA
AACATAGCAATGGCCCAGAGGAACCAGGACCTGCCACCTGAAGGCTGCAGCAAGGACACTTTTAAAGAAG
AGACTCCTAGAACTCCCAGCAATGGCCCAGGCCATGAGCACAGCAGCCATGCTTGGGCAGAGGTGCCAGA
GGGTACCTCTCAGGACACTGGCAATAGCGGCTCTGTAGAGCACCCTTTTGAAACCAAGAAGCTCAATGGA
AAGGCCCTGAGCAGTCGGGCTGAGGAGCCGCCTTCTCCTCCTGTCCCCAAGGCATCTGGCTCCACTCTCA
ACAGCGGGTCTGGCAACTGTCCCAGGACCCAGTCTGATGACAGTGAGGAGAGGAGCCTCGAAACCATCTG
TGCCAACCACAACAATGGACGCTTACACCCTCGTCCCCCTCACCCTCACAATAACGGGCAGAACTTGGGG
GAGCTGGAGGTGGTGGCCTACTCTTCCCCAGGACACTCAGACACTGACCGTGATAACTCGTCCCTGACAG
GGACACTCCTACACAAAGATTGTTGCGGGTCTGAAATGGCCTGTGAGACCCCCAATGCTGGAACAAGAGA
GGACCCCACTGACACCCCAGCCACAGATAGTAGCAGGGCTGTTCATGGCCACAGTGGCCTCAAAAGGCAA
CGAATTGAATTGGAAGATACAGATTCAGAGAATTCCTCCTCAGAGAAGAAATTAAAAACATGA

Translation (860 aa):
MEQAIHSRVKPIQLKGEHHSNIFCLAFNSGNTKVFSGGNDEQVILHDVESSETLDVFAHEDAVYGLSVSP
VNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQS
SLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRD
QYILSGSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP
YKQPGCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMAFFDSLVRREIEGWSS
DSDSDLSESTILQLHAGVSERSGYTDSESSASLPRSPPPTVDESADNAFHLGPLRVTTTNTVASTPPTPT
CEDAASRQQRLSALRRYQDKRLLALSNESDSEENVCEVELDTDLFPRPRSPSPEDESSSSSSSSSSEDEE
ELNERRASTWQRNAMRRRQKTTREDKPSAPIKPTNTYIGEDNYDYPQIKVDDLSSSPTSSPERSTSTLEI
QPSRASPTSDIESVERKIYKAYKWLRYSYISYSNNKDGETSLVTGEADEGRAGTSHKDNPAPSSSKEACL
NIAMAQRNQDLPPEGCSKDTFKEETPRTPSNGPGHEHSSHAWAEVPEGTSQDTGNSGSVEHPFETKKLNG
KALSSRAEEPPSPPVPKASGSTLNSGSGNCPRTQSDDSEERSLETICANHNNGRLHPRPPHPHNNGQNLG
ELEVVAYSSPGHSDTDRDNSSLTGTLLHKDCCGSEMACETPNAGTREDPTDTPATDSSRAVHGHSGLKRQ
RIELEDTDSENSSSEKKLKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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