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Report for CCDS6226.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6226.1 Public Homo sapiens 8 MRPS28 24 110 108 CCDS HistoryNCBI Gene:28957Re-query CCDS DB by CCDS ID:6226.1Re-query CCDS DB by GeneID:28957See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6226.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000276585.9 ENSP00000276585.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000276585.9Link to Ensembl Protein Viewer:ENSP00000276585.4Re-query CCDS DB by Nucleotide ID:ENST00000276585Re-query CCDS DB by Protein ID:ENSP00000276585
Original member Current member NCBI NM_014018.3 NP_054737.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014018.3Link to Protein Sequence:NP_054737.1Re-query CCDS DB by Nucleotide ID:NM_014018Re-query CCDS DB by Protein ID:NP_054737Link to BLAST:NP_054737.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054737.1 187 Q9Y2Q9 187 100% 0 0

Chromosomal Locations for CCDS 6226.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 79918980 79919148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80002999 80003180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80030036 80030248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (564 nt):
ATGGCGGCGCTGTGTCGGACCCGTGCTGTGGCTGCCGAGAGCCATTTTCTGCGAGTGTTTCTCTTCTTCA
GGCCCTTTCGGGGTGTAGGCACTGAGAGTGGATCCGAAAGTGGTAGTTCCAATGCCAAGGAGCCTAAGAC
GCGCGCAGGCGGTTTCGCGAGCGCGTTGGAGCGGCACTCGGAGCTTCTACAGAAGGTGGAGCCCCTACAG
AAGGGTTCTCCAAAAAATGTGGAATCCTTTGCATCTATGCTGAGACATTCTCCTCTTACACAGATGGGAC
CTGCAAAGGATAAACTGGTCATTGGACGGATCTTTCATATTGTGGAGAATGATCTGTACATAGATTTTGG
TGGAAAGTTTCATTGTGTATGTAGAAGACCAGAAGTGGATGGAGAGAAATACCAGAAAGGAACCAGGGTC
CGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAG
AGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAA
ATAA

Translation (187 aa):
MAALCRTRAVAAESHFLRVFLFFRPFRGVGTESGSESGSSNAKEPKTRAGGFASALERHSELLQKVEPLQ
KGSPKNVESFASMLRHSPLTQMGPAKDKLVIGRIFHIVENDLYIDFGGKFHCVCRRPEVDGEKYQKGTRV
RLRLLDLELTSRFLGATTDTTVLEANAVLLGIQESKDSRSKEEHHEK


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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