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Report for CCDS62419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62419.1 Public Homo sapiens 18 FHOD3 24 110 108 CCDS HistoryNCBI Gene:80206Re-query CCDS DB by CCDS ID:62419.1Re-query CCDS DB by GeneID:80206See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62419.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359247.8 ENSP00000352186.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359247.8Link to Ensembl Protein Viewer:ENSP00000352186.3Re-query CCDS DB by Nucleotide ID:ENST00000359247Re-query CCDS DB by Protein ID:ENSP00000352186
Original member Current member NCBI NM_001281739.3 NP_001268668.1 Accepted alive Link to Nucleotide Sequence:NM_001281739.3Link to Protein Sequence:NP_001268668.1Re-query CCDS DB by Nucleotide ID:NM_001281739Re-query CCDS DB by Protein ID:NP_001268668Link to BLAST:NP_001268668.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268668.1 1422 Q2V2M9-1 1422 100% 0 0

Chromosomal Locations for CCDS 62419.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 36297836 36298000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36355539 36355645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36372680 36372744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36501932 36501999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36512438 36512543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36576451 36576545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36594787 36594898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36602674 36602768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36611952 36612095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36625511 36625749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36658075 36658188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36681436 36681570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36693209 36693423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36709095 36709391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36717832 36718715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36730646 36730804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36740656 36740838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36742737 36742856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36744032 36744193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36746945 36747135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36755119 36755311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36760608 36760782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36769265 36769426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36779448 36779530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4269 nt):
ATGGCCACGCTGGCTTGCCGGGTGCAGTTCTTGGACGACACGGACCCTTTCAACAGCACCAACTTCCCCG
AGCCCAGCCGGCCGCCGCTGTTCACGTTCCGCGAGGACCTCGCGCTCGGCACCCAGCTGGCGGGGGTCCA
TAGGCTGCTGCAGGCGCCGCACAAGCTGGATGACTGTACTCTGCAGCTCTCTCACAATGGCGCCTACCTG
GATTTGGAGGCCACCCTGGCAGAGCAGCGGGATGAGTTGGAAGGCTTCCAGGATGACGCCGGGCGGGGCA
AGAAGCACAGCATCATCCTAAGGACGCAGCTGTCTGTGAGGGTCCATGCCTGCATCGAAAAACTATACAA
CTCCAGCGGACGAGATTTGAGAAGGGCCCTCTTCTCCCTGAAGCAGATATTTCAGGATGACAAGGATTTG
GTGCATGAATTTGTAGTGGCTGAAGGTCTGACATGTTTGATCAAGGTGGGAGCTGAGGCTGATCAGAACT
ATCAGAACTACATCTTAAGGGCTTTGGGCCAGATTATGTTGTATGTGGATGGAATGAATGGAGTAATAAA
CCGCAATGAAACCATTCAGTGGCTGTACACTCTCATTGGGTCAAAGTTCCGCCTGGTGGTGAAGACAGCC
CTGAAGCTGCTGCTCGTCTTTGTAGAGTACTCGGAGTCCAACGCACCTCTCCTAATTCAGGCTGTCACTG
CTGTTGACACGAAAAGAGGGGTCAAACCTTGGTCAAATATCATGGAAATCCTGGAGGAAAAAGATGGAGT
TGATACGGAGCTACTGGTTTATGCAATGACTTTGGTGAACAAGACGTTATCAGGACTACCAGACCAAGAC
ACCTTCTACGACGTCGTGGACTGCCTGGAGGAGCTGGGCATTGCTGCTGTGTCCCAGAGGCACTTGAACA
AGAAAGGGACTGACCTGGACTTAGTGGAGCAACTCAACATTTATGAGGTGGCGCTCAGGCACGAGGATGG
CGATGAGACCACGGAGCCACCCCCCAGTGGGTGCCGGGACCGGAGGAGGGCCAGCGTGTGTTCCAGTGGC
GGAGGCGAGCACCGGGGCCTGGACCGCAGAAGGAGCCGCAGGCACTCGGTGCAGAGCATCAAGAGCACCC
TGTCGGCCCCCACCAGTCCCTGCTCCCAGTCAGCTCCCAGCTTCAAGCCCAACCAAGTGCGAGATCTGCG
TGAAAAATACAGCAATTTTGGCAATAACTCTTATCACTCCTCAAGACCCTCATCTGGATCCAGTGTGCCC
ACCACCCCCACATCATCCGTCTCACCCCCACAGGAGGCCAGGTTGGAAAGGTCATCACCGAGTGGTCTTC
TCACATCATCCTTCAGGCAGCACCAAGAGTCACTGGCAGCAGAGAGAGAGAGGCGGCGGCAGGAGAGAGA
AGAAAGGTTGCAGAGAATAGAGCGGGAAGAAAGAAACAAATTCAGATACAAATACTTGGAACAGTTGGCA
GCTGAGGAGCACGAGAAGGAGCTGAGAAGCCGGAGTGTGAGCCGGGGCAGAGCCGACCTCTCCTTGGACC
TGACCTCGCCAGCAGCCCCAGCCTGCCTGGCTCCTCTGAGCCATAGCCCCTCATCTTCAGACTCTCAAGA
GGCTCTCACGGTGTCTGCCTCCTCCCCAGGAACCCCTCACCATCCCCAAGCAAGTGCCGGGGATCCTGAA
CCCGAATCAGAGGCAGAACCGGAAGCAGAGGCAGGGGCGGGGCAGGTTGCTGATGAAGCTGGCCAGGACA
TAGCCTCTGCCCACGAGGGTGCAGAGACTGAAGTGGAGCAGGCACTAGAGCAAGAGCCGGAAGAAAGAGC
CTCCCTCAGTGAAAAAGAGAGGCAGAACGAGGGGGTGAACGAGAGGGACAACTGCTCTGCCTCCAGCGTC
TCGTCCTCCAGCAGCACGTTGGAGAGGGAGGAGAAGGAGGACAAGCTCTCCAGGGACAGGACAACTGGTT
TGTGGCCCGCAGGTGTCCAGGATGCAGGTGTAAATGGACAGTGTGGCGACATCCTCACCAACAAACGGTT
CATGCTTGACATGCTGTATGCCCATAACAGGAAGTCTCCGGATGATGAGGAGAAGGGGGATGGGGAGGCT
GGGAGGACCCAGCAGGAGGCAGAGGCGGTAGCCAGCCTTGCTACCAGGATATCCACCCTGCAGGCCAACT
CTCAGACCCAGGATGAGAGTGTCAGGAGGGTGGATGTCGGCTGTTTGGACAATCGGGGCAGTGTGAAAGC
ATTTGCTGAGAAATTCAACAGTGGGGACCTGGGGAGAGGTTCCATCTCCCCTGATGCTGAGCCCAATGAC
AAGGTCCCAGAAACAGCGCCGGTGCAGCCGAAGACAGAGTCTGATTACATCTGGGACCAGCTCATGGCCA
ATCCAAGAGAGCTCAGAATCCAAGACATGGATTTCACTGACCTGGGGGAGGAGGATGACATTGATGTCCT
AGATGTGGACCTGGGTCACAGGGAGGCCCCTGGGCCACCTCCCCCACCCCCACCCACCTTTCTGGGTTTG
CCGCCCCCACCCCCTCCGCCCCTGTTGGACAGCATTCCTCCCCCTCCTGTCCCTGGTAATTTATTGGTTC
CTCCTCCTCCAGTGTTCAACGCTCCTCAGGGCTTAGGGTGGTCCCAGGTACCCAGGGGTCAGCCCACATT
CACTAAGAAAAAGAAGACCATCCGTTTGTTCTGGAATGAAGTTCGGCCTTTTGACTGGCCATGTAAAAAC
AACCGACGCTGCAGAGAATTCCTGTGGTCAAAACTGGAACCCATTAAGGTGGACACTTCCAGACTGGAGC
ACCTGTTTGAGTCTAAATCCAAGGAACTGTCTGTCTCAAAGAAAACTGCTGCAGATGGAAAAAGGCAAGA
GATCATTGTTCTGGATTCCAAGAGGAGTAACGCCATCAATATTGGTCTGACGGTGCTGCCCCCTCCAAGG
ACGATTAAGATCGCCATTTTGAATTTTGATGAGTATGCCTTAAACAAAGAAGGAATCGAGAAAATTCTAA
CGATGATTCCCACCGATGAGGAGAAGCAGAAAATCCAGGAAGCTCAGCTGGCCAACCCTGAAATCCCCCT
GGGCAGTGCAGAGCAGTTCCTCCTCACCCTGTCCTCCATCAGCGAGCTCTCTGCACGACTTCACCTCTGG
GCATTCAAAATGGATTATGAAACTACAGAAAAGGAAGTAGCAGAACCACTCCTGGACCTGAAGGAAGGAA
TAGACCAGTTGGAGAACAATAAAACCTTGGGCTTTATCCTGTCTACTCTCTTAGCCATTGGGAACTTTCT
AAATGGAACTAATGCCAAAGCGTTTGAGTTAAGCTACCTCGAGAAGGTTCCAGAAGTCAAAGACACAGTG
CACAAGCAGTCGCTTCTCCACCATGTGTGCACCATGGTGGTAGAAAACTTCCCAGACAGCTCCGATCTGT
ACTCGGAGATCGGGGCCATCACCAGGTCAGCCAAGGTTGACTTTGATCAACTTCAGGATAATTTATGTCA
GATGGAGAGAAGATGCAAAGCTTCATGGGATCACCTCAAGGCAATTGCAAAACATGAAATGAAACCAGTT
TTAAAACAACGGATGTCAGAGTTCCTGAAAGACTGTGCAGAGCGAATTATAATTTTAAAGATTGTCCATA
GAAGGATAATCAACAGATTCCACTCCTTTTTACTCTTTATGGGCCATCCACCTTATGCAATTCGGGAAGT
GAACATAAACAAATTCTGCAGGATTATTAGTGAATTTGCACTAGAGTATCGCACAACCAGGGAAAGGGTT
TTGCAGCAGAAACAGAAACGGGCCAACCACAGAGAGAGAAATAAGACCAGAGGGAAGATGATCACCGATT
CTGGCAAGTTCTCCGGCAGTTCTCCGGCGCCCCCAAGCCAGCCGCAGGGTCTGAGCTATGCGGAGGACGC
GGCTGAGCACGAGAACATGAAGGCTGTGCTGAAAACCTCGTCCCCCTCCGTGGAGGACGCCACCCCCGCG
CTGGGCGTCCGCACACGCAGCCGAGCAAGCCGAGGATCCACTAGTTCCTGGACTATGGGAACTGATGACT
CGCCCAATGTCACAGATGATGCAGCTGATGAGATCATGGACCGCATCGTCAAGTCAGCCACCCAAGTGCC
CAGTCAGCGAGTGGTGCCGAGGGAGAGGAAACGATCCCGGGCCAACCGGAAATCTTTGCGAAGAACCCTG
AAGAGCGGCCTGACCCCAGAAGAAGCCAGAGCCCTGGGCTTGGTTGGCACCTCGGAGTTGCAGCTGTGA

Translation (1422 aa):
MATLACRVQFLDDTDPFNSTNFPEPSRPPLFTFREDLALGTQLAGVHRLLQAPHKLDDCTLQLSHNGAYL
DLEATLAEQRDELEGFQDDAGRGKKHSIILRTQLSVRVHACIEKLYNSSGRDLRRALFSLKQIFQDDKDL
VHEFVVAEGLTCLIKVGAEADQNYQNYILRALGQIMLYVDGMNGVINRNETIQWLYTLIGSKFRLVVKTA
LKLLLVFVEYSESNAPLLIQAVTAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLSGLPDQD
TFYDVVDCLEELGIAAVSQRHLNKKGTDLDLVEQLNIYEVALRHEDGDETTEPPPSGCRDRRRASVCSSG
GGEHRGLDRRRSRRHSVQSIKSTLSAPTSPCSQSAPSFKPNQVRDLREKYSNFGNNSYHSSRPSSGSSVP
TTPTSSVSPPQEARLERSSPSGLLTSSFRQHQESLAAERERRRQEREERLQRIEREERNKFRYKYLEQLA
AEEHEKELRSRSVSRGRADLSLDLTSPAAPACLAPLSHSPSSSDSQEALTVSASSPGTPHHPQASAGDPE
PESEAEPEAEAGAGQVADEAGQDIASAHEGAETEVEQALEQEPEERASLSEKERQNEGVNERDNCSASSV
SSSSSTLEREEKEDKLSRDRTTGLWPAGVQDAGVNGQCGDILTNKRFMLDMLYAHNRKSPDDEEKGDGEA
GRTQQEAEAVASLATRISTLQANSQTQDESVRRVDVGCLDNRGSVKAFAEKFNSGDLGRGSISPDAEPND
KVPETAPVQPKTESDYIWDQLMANPRELRIQDMDFTDLGEEDDIDVLDVDLGHREAPGPPPPPPPTFLGL
PPPPPPPLLDSIPPPPVPGNLLVPPPPVFNAPQGLGWSQVPRGQPTFTKKKKTIRLFWNEVRPFDWPCKN
NRRCREFLWSKLEPIKVDTSRLEHLFESKSKELSVSKKTAADGKRQEIIVLDSKRSNAINIGLTVLPPPR
TIKIAILNFDEYALNKEGIEKILTMIPTDEEKQKIQEAQLANPEIPLGSAEQFLLTLSSISELSARLHLW
AFKMDYETTEKEVAEPLLDLKEGIDQLENNKTLGFILSTLLAIGNFLNGTNAKAFELSYLEKVPEVKDTV
HKQSLLHHVCTMVVENFPDSSDLYSEIGAITRSAKVDFDQLQDNLCQMERRCKASWDHLKAIAKHEMKPV
LKQRMSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYRTTRERV
LQQKQKRANHRERNKTRGKMITDSGKFSGSSPAPPSQPQGLSYAEDAAEHENMKAVLKTSSPSVEDATPA
LGVRTRSRASRGSTSSWTMGTDDSPNVTDDAADEIMDRIVKSATQVPSQRVVPRERKRSRANRKSLRRTL
KSGLTPEEARALGLVGTSELQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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