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Report for CCDS63426.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63426.1 Public Homo sapiens 22 GUCD1 24 110 108 CCDS HistoryNCBI Gene:83606Re-query CCDS DB by CCDS ID:63426.1Re-query CCDS DB by GeneID:83606See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63426.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398245.8 ENSP00000381297.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398245.8Link to Ensembl Protein Viewer:ENSP00000381297.4Re-query CCDS DB by Nucleotide ID:ENST00000398245Re-query CCDS DB by Protein ID:ENSP00000381297
Original member Current member EBI ENST00000435822.6 ENSP00000405985.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000435822.6Link to Ensembl Protein Viewer:ENSP00000405985.1Re-query CCDS DB by Nucleotide ID:ENST00000435822Re-query CCDS DB by Protein ID:ENSP00000405985
Original member Current member NCBI NM_001284254.2 NP_001271183.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001284254.2Link to Protein Sequence:NP_001271183.1Re-query CCDS DB by Nucleotide ID:NM_001284254Re-query CCDS DB by Protein ID:NP_001271183Link to BLAST:NP_001271183.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271183.1 239 Q96NT3-2 239 100% 0 0

Chromosomal Locations for CCDS 63426.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 24543006 24543097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 24543842 24544083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 24546914 24547005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 24547908 24548073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 24548917 24549001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 24554949 24554991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (720 nt):
ATGAGGACGGAGGCGGAGGCAGCGGGGCCGCCGCTCGAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCG
TCATCCAGCAGCTCTACCACTGGGACTGTGGCCTGGCCTGCTCCAGGATGGTGCTGCGGTACCTGGGCCA
GCTGGACGACAGTGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCATCTGGACCATCGAC
CTGGCCTACCTGATGCACCACTTTGGCGTGAGGCACCGCTTCTGTACCCAGACCCTGGGTGTCGACAAGG
GCTACAAGAACCAGTCCTTCTACAGGAAGCACTTTGACACAGAAGAGACCCGGGTGAATCAGCTGTTTGC
ACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAAATGCACAGTGAGTGTGAAGGACATCCAGGCGCACCTG
GCTCAGGGCCATGTGGCCATCGTGCTGGTGAACTCGGGGGTGCTGCACTGTGACCTGTGCTCCAGCCCTG
TCAAGTACTGCTGCTTCACCCCCAGTGGCCACCACTGCTTCTGCCGCACTCCTGACTACCAGGGCCACTT
CATCGTGCTGCGTGGCTACAACCGGGCCACTGGCTGCATCTTCTACAACAACCCAGCCTATGCCGACCGA
ATGTGCAGCACCAGCATCAGTAACTTTGAGGAGGCCAGAACCAGCTATGGCACAGATGAGGACATCCTCT
TTGTCTACTTGGACAGCTGA

Translation (239 aa):
MRTEAEAAGPPLEPGDFVQLPVPVIQQLYHWDCGLACSRMVLRYLGQLDDSEFERALQKLQLTRSIWTID
LAYLMHHFGVRHRFCTQTLGVDKGYKNQSFYRKHFDTEETRVNQLFAQAKACKVLVEKCTVSVKDIQAHL
AQGHVAIVLVNSGVLHCDLCSSPVKYCCFTPSGHHCFCRTPDYQGHFIVLRGYNRATGCIFYNNPAYADR
MCSTSISNFEEARTSYGTDEDILFVYLDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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