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Report for CCDS64066.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64066.1 Public Homo sapiens 4 MGAT4D 24 110 108 CCDS HistoryNCBI Gene:152586Re-query CCDS DB by CCDS ID:64066.1Re-query CCDS DB by GeneID:152586See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 64066.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000511113.6 ENSP00000421185.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000511113.6Link to Ensembl Protein Viewer:ENSP00000421185.1Re-query CCDS DB by Nucleotide ID:ENST00000511113Re-query CCDS DB by Protein ID:ENSP00000421185
Original member Current member NCBI NM_001277353.2 NP_001264282.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001277353.2Link to Protein Sequence:NP_001264282.1Re-query CCDS DB by Nucleotide ID:NM_001277353Re-query CCDS DB by Protein ID:NP_001264282Link to BLAST:NP_001264282.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001264282.1 374 A6NG13 374 100% 0 0

Chromosomal Locations for CCDS 64066.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 140443436 140443444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140451410 140451517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140456589 140456719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140459512 140459626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140461929 140462004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140464896 140465009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140471775 140471821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140474813 140474946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140479490 140479627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140482327 140482485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 140498129 140498222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1125 nt):
ATGAGGACCAAGCAGGTGAACTTGCTGATCACCCTGGTCGCCGTCGCGTTGTTCAGCTTCTCTTGCTTCT
CCATCTACAGGATAACTCAAACCAATAATCAATTAATTAACTGTAGAAACCATATTTTGGAGTTTAAAGA
AAATATGCTACACTTAAGAAACAAAACTGAAAAAAATACCCAAGAGATGATGAAAGTTTTGAATCGAATG
AAGTATGAAATTACAAAGAGAGAAATTTTGTCAGGAAACTTAGTTGCACAGAAAGCAGACATATTAAATA
AAAATGAAACAGTATCTAATACATTTGAAGACTTAAAGTTCTTTTTTCCTCATCTAAGGAAAGAAGGTAG
AATTTATCCTGATGTAATCATTGGCAAAGGGAAAACTGGTGTTTCTTTTGCGCTGGGTATTTCCACTGTT
AACAGAGGAAATTATAGTTACCTGAAACAGACACTGACCTCTGTTGTCTCCAGGATGACGCTCTCCCAAG
AGAAGGATTCTGTAGTGATTGTCTTGGTTGCAGATAGTAATGAAGATTATTTACATTCTGTTGTTAAAAT
GATTACAAAAAAATTCAAAAGGCAAGTGAGGTCTGGATCCTTAGAGGTCATTTCAATACCTGCCTTTTTA
TACTCAAGCATGTTAAATGCCAAGCACTTAGCTGAGGCCTCACAAAAATTAGCCAGTTGGCGAATCAAAC
AGGTATTGGATTTTTGCATTTTGTTGCTGTATGCCCAACCCAAGGCCAAGTATTATTTACAGCTAGAAGA
TGATATCATAGCTAAAGAGATGTACTTTACAAAAATAACAGATTTTGTAGGTAATATCAGTTCAAATAAT
TGGTTTTTTATTGAGTTTTCAATGCTTGGATTCATAGGAAAGCTGTTTAGATCTGAGGACTTAACTCACT
TTGTACGGTTTTTTTTAATGTTCTACAAAGAGAAACCCATAGACTGGCTCTTGAATGACATTTTTCAGGT
AAAGGTGTGTGACGCAGGAGAAGATCTTAGAAACTGTATGAAACGAAAGAAGCAAATACGTATTCAGTAT
AAACCTTCTCTTTTCCAGCATGTGGGTATACATTCATCATTCCCTAGAAAAGAACAATATGAAAAAAAAA
TATGA

Translation (374 aa):
MRTKQVNLLITLVAVALFSFSCFSIYRITQTNNQLINCRNHILEFKENMLHLRNKTEKNTQEMMKVLNRM
KYEITKREILSGNLVAQKADILNKNETVSNTFEDLKFFFPHLRKEGRIYPDVIIGKGKTGVSFALGISTV
NRGNYSYLKQTLTSVVSRMTLSQEKDSVVIVLVADSNEDYLHSVVKMITKKFKRQVRSGSLEVISIPAFL
YSSMLNAKHLAEASQKLASWRIKQVLDFCILLLYAQPKAKYYLQLEDDIIAKEMYFTKITDFVGNISSNN
WFFIEFSMLGFIGKLFRSEDLTHFVRFFLMFYKEKPIDWLLNDIFQVKVCDAGEDLRNCMKRKKQIRIQY
KPSLFQHVGIHSSFPRKEQYEKKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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