NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS6433.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6433.1 Public Homo sapiens 8 RPL8 24 110 108 CCDS HistoryNCBI Gene:6132Re-query CCDS DB by CCDS ID:6433.1Re-query CCDS DB by GeneID:6132See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6433.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262584.7 ENSP00000262584.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000262584.7Link to Ensembl Protein Viewer:ENSP00000262584.3Re-query CCDS DB by Nucleotide ID:ENST00000262584Re-query CCDS DB by Protein ID:ENSP00000262584
Original member Current member EBI ENST00000394920.6 ENSP00000378378.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394920.6Link to Ensembl Protein Viewer:ENSP00000378378.2Re-query CCDS DB by Nucleotide ID:ENST00000394920Re-query CCDS DB by Protein ID:ENSP00000378378
Original member Current member EBI ENST00000528957.6 ENSP00000433464.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000528957.6Link to Ensembl Protein Viewer:ENSP00000433464.2Re-query CCDS DB by Nucleotide ID:ENST00000528957Re-query CCDS DB by Protein ID:ENSP00000433464
Original member Current member NCBI NM_000973.5 NP_000964.1 Accepted alive Link to Nucleotide Sequence:NM_000973.5Link to Protein Sequence:NP_000964.1Re-query CCDS DB by Nucleotide ID:NM_000973Re-query CCDS DB by Protein ID:NP_000964Link to BLAST:NP_000964.1
Original member Current member NCBI NM_001317771.2 NP_001304700.1 Accepted alive Link to Nucleotide Sequence:NM_001317771.2Link to Protein Sequence:NP_001304700.1Re-query CCDS DB by Nucleotide ID:NM_001317771Re-query CCDS DB by Protein ID:NP_001304700Link to BLAST:NP_001304700.1
Original member Current member NCBI NM_001317782.2 NP_001304711.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001317782.2Link to Protein Sequence:NP_001304711.1Re-query CCDS DB by Nucleotide ID:NM_001317782Re-query CCDS DB by Protein ID:NP_001304711Link to BLAST:NP_001304711.1
Original member Current member NCBI NM_033301.3 NP_150644.1 Accepted alive Link to Nucleotide Sequence:NM_033301.3Link to Protein Sequence:NP_150644.1Re-query CCDS DB by Nucleotide ID:NM_033301Re-query CCDS DB by Protein ID:NP_150644Link to BLAST:NP_150644.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000964.1 257 P62917 257 100% 0 0
NP_001304700.1 257 P62917 257 100% 0 0
NP_001304711.1 257 P62917 257 100% 0 0
NP_150644.1 257 P62917 257 100% 0 0

Chromosomal Locations for CCDS 6433.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144789804 144789962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144790355 144790470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144791277 144791495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144791773 144791914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144791992 144792129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGGGCCGTGTGATCCGTGGACAGAGGAAGGGCGCCGGGTCTGTGTTCCGCGCGCACGTGAAGCACCGTA
AAGGCGCTGCGCGCCTGCGCGCCGTGGATTTCGCTGAGCGGCACGGCTACATCAAGGGCATCGTCAAGGA
CATCATCCACGACCCGGGCCGCGGCGCGCCCCTCGCCAAGGTGGTCTTCCGGGATCCGTATCGGTTTAAG
AAGCGGACGGAGCTGTTCATTGCCGCCGAGGGCATTCACACGGGCCAGTTTGTGTATTGCGGCAAGAAGG
CCCAGCTCAACATTGGCAATGTGCTCCCTGTGGGCACCATGCCTGAGGGTACAATCGTGTGCTGCCTGGA
GGAGAAGCCTGGAGACCGTGGCAAGCTGGCCCGGGCATCAGGGAACTATGCCACCGTTATCTCCCACAAC
CCTGAGACCAAGAAGACCCGTGTGAAGCTGCCCTCCGGCTCCAAGAAGGTTATCTCCTCAGCCAACAGAG
CTGTGGTTGGTGTGGTGGCTGGAGGTGGCCGAATTGACAAACCCATCTTGAAGGCTGGCCGGGCGTACCA
CAAATATAAGGCAAAGAGGAACTGCTGGCCACGAGTACGGGGTGTGGCCATGAATCCTGTGGAGCATCCT
TTTGGAGGTGGCAACCACCAGCACATCGGCAAGCCCTCCACCATCCGCAGAGATGCCCCTGCTGGCCGCA
AAGTGGGTCTCATTGCTGCCCGCCGGACTGGACGTCTCCGGGGAACCAAGACTGTGCAGGAGAAAGAGAA
CTAG

Translation (257 aa):
MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFK
KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHN
PETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHP
FGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH