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Report for CCDS64449.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64449.1 Public Homo sapiens 6 MLIP 24 110 108 CCDS HistoryNCBI Gene:90523Re-query CCDS DB by CCDS ID:64449.1Re-query CCDS DB by GeneID:90523See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64449.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000502396.6 ENSP00000426290.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000502396.6Link to Ensembl Protein Viewer:ENSP00000426290.1Re-query CCDS DB by Nucleotide ID:ENST00000502396Re-query CCDS DB by Protein ID:ENSP00000426290
Original member Current member NCBI NM_001281747.2 NP_001268676.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001281747.2Link to Protein Sequence:NP_001268676.1Re-query CCDS DB by Nucleotide ID:NM_001281747Re-query CCDS DB by Protein ID:NP_001268676Link to BLAST:NP_001268676.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268676.1 993 Q5VWP3-3 993 100% 0 0

Chromosomal Locations for CCDS 64449.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 54111480 54111575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54121447 54121602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54124473 54124865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54136715 54138286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54149056 54149127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54160367 54160432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54160516 54160599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54160740 54160799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54169528 54169572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54189870 54189914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54202105 54202233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54230714 54230917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54257308 54257361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54265950 54265955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2982 nt):
ATGCTTTCAGAACAGGGGCTTCTGAGTGACTGCGGGAACAATTACTTCCAAATGACCTCGTGCATCTTAT
CAGGGAGCATTCAGACCACACCCCAGGTCTCTGCTGGTGGTTCTGAAGCCAAACCTCTGATCTTCACATT
TGTCCCCACTGTCAGAAGACTACCAACCCATACTCAGTTGGCTGACACCTCTAAATTCCTTGTTAAAATT
CCAGAAGAATCAAGTGATAAGAGTCCAGAAACTGTAAATAGGTCTAAATCCAATGACTACTTGACCTTGA
ATGCTGGGAGCCAACAAGAGAGAGACCAAGCGAAATTGACTTGTCCTTCAGAGGTCAGTGGAACGATTTT
ACAAGAAAGGGAATTCGAAGCAAACAAACTTCAAGGGATGCAGCAAAGTGACCTCTTCAAAGCTGAATAT
GTCCTTATTGTGGACTCCGAAGGGGAAGATGAGGCTGCAAGCAGAAAAGTTGAACAAGGCCCCCCAGGGG
GGATTGGCACCGCAGCTGTCCGGCCCAAGTCTCTAGCTATCTCGTCCAGTCTGGTCTCTGATGTAGTGCG
TCCCAAAACACAGGGGACTGATCTCAAGACCTCATCACATCCTGAAATGCTTCATGGGATGGCCCCTCAG
CAAAAGCATGGGCAGTTAACTTCTTCTCCCACTACCTCTGAGCAGCTTGCCTGTAAACCACCTGCTTTCT
CCTTTGTTTCTCCAACTAATCCGAACACACCACCCGACCCAGTTAACCTCGAGGGAGCCTCTGTCCTAGA
GGAGTTCCACACTAGGAGGCTGGATGTCGGTGGGGCCGTGGTGGAAGAATCAGCTACGTATTTTCAAACT
ACCGCTCACTCTACACCCTTTTCTGCATCGAAGGGCACCTCCTCGACGTTACTGTTTCCCCATTCCACTC
AACTATCAGGTTCTAATTTACCCAGTTCAACTGCAGCAGATCCAAAGCCTGGACTGACCTCTGAAGTTCT
CAAGAAGACAACTTTAACCTCGCATGTCCTTAGTCACGGAGAAAGTCCGAGAACCTCTTCTTCTCCACCG
TCCTCCAGTGCTTCTCTGAAGTCGAATTCGGCCTCGTACATACCAGTCCGCATTGTCACGCATTCACTCT
CTCCGAGCCCCAAACCATTTACCTCCTCTTTCCACGGCTCTTCTTCCACCATCTGCAGCCAAATGTCATC
TAGTGGAAATCTTTCAAAGTCAGGGGTAAAATCCCCGGTGCCTTCCCGGCTTGCCCTTCTCACTGCCATT
CTCAAGTCAAACCCTTCCCACCAAAGACCCTTTTCCCCTGCATCCTGTCCCACCTTCTCTCTCAACTCCC
CGGCCTCTTCCACGCTCACACTTGACCAAAAAGAAAAGCAGACCCCACCCACGCCTAAAAAATCTCTCTC
AAGTTGTTCCCTGAGAGCCGGGTCACCAGATCAAGGGGAACTCCAGGTTTCTGAATTGACCCAGCAATCT
TTTCACCTGCCTGTTTTCACCAAGTCTACTCCGCTTTCTCAGGCGCCCTCCCTCTCTCCTACAAAACAGG
CTAGTAGCAGCCTTGCTTCCATGAATGTAGAGAGAACACCATCACCTACTTTGAAGAGCAATACCATGCT
CTCCCTGCTACAAACCAGTACATCCAGTTCTGTGGGTCTTCCTCCTGTTCCACCAAGCTCTTCTCTTTCC
TCTTTGAAGAGTAAACAGGATGGTGACCTCAGGGGTCCAGAAAACCCCAGAAACATTCACACGTACCCTT
CTACATTAGCCTCCTCTGCATTATCTTCTCTATCTCCTCCTATTAATCAAAGAGCTACGTTCTCTTCTTC
AGAGAAATGTTTCCATCCTTCCCCAGCTCTTTCAAGCCTGATAAACAGATCTAAAAGAGCATCATCCCAA
CTATCTGGCCAGGAGCTGAATCCTTCAGCTCTTCCTTCACTCCCTGTCTCCAGTGCTGACTTTGCCTCTC
TTCCCAACTTGAGGTCCTCCTCTCTCCCTCATGCCAATCTGCCCACCCTGGTGCCCCAGCTCAGTCCCTC
AGCTCTGCACCCACATTGCGGCAGTGGTACCTTGCCTTCAAGACTTGGGAAATCTGAAAGCACCACCCCC
AACCACAGGTCACCTGTTTCAACCCCATCACTTCCCATATCTCTAACAAGGACAGAGGAGCTGATTTCAC
CTTGTGCATTGTCCATGTCAACAGGCCCAGAAAATAAGAAATCAAAGCAATACAAGACCAAGTCAAGCTA
CAAGGCTTTTGCAGCAATCCCTACAAACACATTGCTTTTGGAACAGAAGGCACTAGATGAACCAGCCAAG
ACTGAAAGTGTCTCCAAGGACAACACATTAGAACCACCAGTGGAGCTCTATTTTCCTGCACAGCTCAGGC
AGCAAACTGAAGAGCTCTGTGCTACCATTGATAAGGTCTTACAGGATTCCTTGTCTATGCATTCTTCTGA
TTCTCCTTCAAGGTCCCCAAAGACATTGTTGGGTTCTGACACAGTCAAAACTCCTACAACTCTTCCAAGA
GCAGCTGGTCGAGAAACCAAATATGCAAATCTCTCCTCACCATCTTCTACAGTATCTGAGAGTCAGCTGA
CTAAGCCTGGAGTAATTCGCCCAGTACCTGTAAAATCCAGAATATTACTGAAAAAAGAGGAGGAAGTCTA
TGAACCCAACCCTTTCAGTAAATACTTGGAAGATAACAGCGACCTCTTTTCTGAACAGGATGTAACAGTC
CCTCCCAAGCCTGTCTCGCTCCATCCTTTATATCAGACTAAACTCTATCCTCCTGCTAAGTCACTGCTGC
ATCCACAGACCCTCTCACATGCTGACTGTCTTGCCCCAGGACCCTTCAGTCATCTGTCCTTCTCCTTGAG
TGATGAACAGGAGAATTCTCACACCCTCCTCAGTCACAACGCATGCAACAAGCTGAGTCATCCAATGGTG
GCTATTCCTGAACATGAAGCTCTTGATTCCAAAGAGCAATGA

Translation (993 aa):
MLSEQGLLSDCGNNYFQMTSCILSGSIQTTPQVSAGGSEAKPLIFTFVPTVRRLPTHTQLADTSKFLVKI
PEESSDKSPETVNRSKSNDYLTLNAGSQQERDQAKLTCPSEVSGTILQEREFEANKLQGMQQSDLFKAEY
VLIVDSEGEDEAASRKVEQGPPGGIGTAAVRPKSLAISSSLVSDVVRPKTQGTDLKTSSHPEMLHGMAPQ
QKHGQLTSSPTTSEQLACKPPAFSFVSPTNPNTPPDPVNLEGASVLEEFHTRRLDVGGAVVEESATYFQT
TAHSTPFSASKGTSSTLLFPHSTQLSGSNLPSSTAADPKPGLTSEVLKKTTLTSHVLSHGESPRTSSSPP
SSSASLKSNSASYIPVRIVTHSLSPSPKPFTSSFHGSSSTICSQMSSSGNLSKSGVKSPVPSRLALLTAI
LKSNPSHQRPFSPASCPTFSLNSPASSTLTLDQKEKQTPPTPKKSLSSCSLRAGSPDQGELQVSELTQQS
FHLPVFTKSTPLSQAPSLSPTKQASSSLASMNVERTPSPTLKSNTMLSLLQTSTSSSVGLPPVPPSSSLS
SLKSKQDGDLRGPENPRNIHTYPSTLASSALSSLSPPINQRATFSSSEKCFHPSPALSSLINRSKRASSQ
LSGQELNPSALPSLPVSSADFASLPNLRSSSLPHANLPTLVPQLSPSALHPHCGSGTLPSRLGKSESTTP
NHRSPVSTPSLPISLTRTEELISPCALSMSTGPENKKSKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAK
TESVSKDNTLEPPVELYFPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSRSPKTLLGSDTVKTPTTLPR
AAGRETKYANLSSPSSTVSESQLTKPGVIRPVPVKSRILLKKEEEVYEPNPFSKYLEDNSDLFSEQDVTV
PPKPVSLHPLYQTKLYPPAKSLLHPQTLSHADCLAPGPFSHLSFSLSDEQENSHTLLSHNACNKLSHPMV
AIPEHEALDSKEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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