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Report for CCDS6503.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6503.1 Public Homo sapiens 9 KLHL9 24 110 108 CCDS HistoryNCBI Gene:55958Re-query CCDS DB by CCDS ID:6503.1Re-query CCDS DB by GeneID:55958See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6503.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359039.5 ENSP00000351933.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359039.5Link to Ensembl Protein Viewer:ENSP00000351933.4Re-query CCDS DB by Nucleotide ID:ENST00000359039Re-query CCDS DB by Protein ID:ENSP00000351933
Original member Current member NCBI NM_018847.4 NP_061335.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018847.4Link to Protein Sequence:NP_061335.1Re-query CCDS DB by Nucleotide ID:NM_018847Re-query CCDS DB by Protein ID:NP_061335Link to BLAST:NP_061335.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061335.1 617 Q9P2J3 617 100% 0 0

Chromosomal Locations for CCDS 6503.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 21333006 21334859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1854 nt):
ATGAAAGTGTCCCTTGGTAACGGCGAAATGGGCGTCTCTGCCCATTTGCAGCCTTGTAAGGCAGGAACCA
CACGCTTTTTTACCAGCAATACTCACAGTTCGGTGGTATTGCAAGGCTTTGATCAGCTTAGAATAGAAGG
ATTGCTTTGTGATGTGACCCTGGTACCAGGTGATGGAGATGAAATCTTCCCTGTTCACAGAGCTATGATG
GCGTCTGCTAGTGATTATTTCAAAGCCATGTTCACAGGTGGAATGAAAGAACAAGATTTGATGTGCATTA
AGCTTCATGGGGTGAACAAGGTTGGTCTGAAGAAAATCATTGATTTTATTTATACTGCAAAACTTTCTCT
TAATATGGACAATCTTCAGGACACACTTGAAGCTGCTAGCTTTTTACAAATATTACCCGTTTTGGATTTC
TGTAAAGTATTTCTTATATCAGGAGTCTCTTTGGATAACTGTGTTGAGGTTGGACGAATTGCTAACACCT
ACAATCTTATAGAAGTGGATAAATATGTTAATAATTTCATCCTGAAGAACTTTCCTGCTTTATTGAGTAC
TGGGGAGTTTCTAAAACTCCCTTTTGAACGACTTGCATTTGTGCTTTCCAGTAATAGTCTTAAGCACTGT
ACCGAACTTGAACTCTTTAAGGCAGCCTGTCGCTGGCTAAGGTTGGAAGACCCTCGGATGGATTATGCTG
CAAAGTTAATGAAGAATATTCGATTTCCACTGATGACACCACAGGATCTCATCAATTACGTGCAGACAGT
AGATTTCATGAGAACAGACAATACCTGCGTGAATTTGCTTTTGGAAGCTAGCAATTACCAAATGATGCCA
TATATGCAGCCAGTGATGCAGTCAGATAGAACTGCCATTCGATCTGACTCCACTCACTTGGTTACATTAG
GAGGAGTTTTGAGGCAGCAGCTGGTTGTCAGTAAAGAATTACGGATGTATGATGAAAGGGCACAAGAATG
GAGATCTTTAGCCCCAATGGATGCTCCCCGTTACCAGCATGGTATTGCTGTCATTGGAAACTTTCTTTAT
GTAGTTGGTGGTCAGAGTAATTATGATACAAAAGGAAAAACTGCTGTTGATACAGTTTTCAGATTTGATC
CTCGGTATAATAAATGGATGCAGGTTGCATCATTAAATGAAAAGCGCACATTCTTTCACTTGAGTGCCCT
CAAAGGACATTTGTATGCAGTTGGTGGGCGCAGTGCAGCTGGTGAACTGGCCACAGTAGAATGTTACAAC
CCAAGAATGAATGAGTGGAGCTATGTTGCAAAAATGAGTGAACCCCACTATGGTCATGCTGGAACAGTAT
ATGGAGGCTTAATGTATATTTCAGGAGGAATTACCCATGACACTTTCCAAAATGAGCTCATGTGTTTTGA
CCCAGATACAGATAAATGGATGCAAAAGGCTCCAATGACTACAGTCAGAGGTCTGCATTGCATGTGTACA
GTTGGAGATAAGCTCTATGTCATTGGTGGCAATCACTTCAGAGGAACAAGTGATTATGATGATGTTCTAA
GCTGTGAATACTATTCACCAACCCTTGACCAGTGGACCCCAATTGCCGCCATGTTAAGAGGCCAAAGTGA
TGTTGGAGTTGCCGTCTTTGAAAATAAAATCTATGTTGTTGGTGGATATTCTTGGAATAATCGTTGTATG
GTAGAAATTGTCCAGAAATATGACCCAGAAAAAGATGAGTGGCATAAAGTTTTTGATCTTCCAGAGTCAC
TTGGTGGCATTCGAGCCTGTACACTCACAGTTTTTCCACCTGAAGAAAACCCTGGGTCACCTTCTAGAGA
ATCACCTCTTTCAGCACCTTCAGATCATTCTTAG

Translation (617 aa):
MKVSLGNGEMGVSAHLQPCKAGTTRFFTSNTHSSVVLQGFDQLRIEGLLCDVTLVPGDGDEIFPVHRAMM
ASASDYFKAMFTGGMKEQDLMCIKLHGVNKVGLKKIIDFIYTAKLSLNMDNLQDTLEAASFLQILPVLDF
CKVFLISGVSLDNCVEVGRIANTYNLIEVDKYVNNFILKNFPALLSTGEFLKLPFERLAFVLSSNSLKHC
TELELFKAACRWLRLEDPRMDYAAKLMKNIRFPLMTPQDLINYVQTVDFMRTDNTCVNLLLEASNYQMMP
YMQPVMQSDRTAIRSDSTHLVTLGGVLRQQLVVSKELRMYDERAQEWRSLAPMDAPRYQHGIAVIGNFLY
VVGGQSNYDTKGKTAVDTVFRFDPRYNKWMQVASLNEKRTFFHLSALKGHLYAVGGRSAAGELATVECYN
PRMNEWSYVAKMSEPHYGHAGTVYGGLMYISGGITHDTFQNELMCFDPDTDKWMQKAPMTTVRGLHCMCT
VGDKLYVIGGNHFRGTSDYDDVLSCEYYSPTLDQWTPIAAMLRGQSDVGVAVFENKIYVVGGYSWNNRCM
VEIVQKYDPEKDEWHKVFDLPESLGGIRACTLTVFPPEENPGSPSRESPLSAPSDHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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