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Report for CCDS65320.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65320.1 Public Homo sapiens X ARHGAP36 24 110 108 CCDS HistoryNCBI Gene:158763Re-query CCDS DB by CCDS ID:65320.1Re-query CCDS DB by GeneID:158763See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 65320.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370922.5 ENSP00000359960.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370922.5Link to Ensembl Protein Viewer:ENSP00000359960.1Re-query CCDS DB by Nucleotide ID:ENST00000370922Re-query CCDS DB by Protein ID:ENSP00000359960
Original member Current member NCBI NM_001282607.2 NP_001269536.1 Accepted alive Link to Nucleotide Sequence:NM_001282607.2Link to Protein Sequence:NP_001269536.1Re-query CCDS DB by Nucleotide ID:NM_001282607Re-query CCDS DB by Protein ID:NP_001269536Link to BLAST:NP_001269536.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269536.1 535 Q6ZRI8-4 535 100% 0 0

Chromosomal Locations for CCDS 65320.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 131058387 131058444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131081760 131081918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131083165 131083230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131083734 131083969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131084215 131084407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131084626 131084681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131084914 131085064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131085588 131085736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131085913 131086089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131086329 131086426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131086559 131086665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 131088628 131088785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1608 nt):
ATGGCGTGGATACTGGACTGCCTTTTCGCCTCGGCCTTTGAGCCCCGCCCCCGCCGTGTGAGTGTCTTGG
GAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAGCCTCTCTGAGCTGGA
GCGTCTGAAGCTGCAAGAGACTGCTTACCACGAACTCGTGGCCAGACATTTCCTCTCCGAATTCAAACCT
GACAGAGCTCTGCCTATTGACCGTCCGAACACCTTGGATAAGTGGTTTCTGATTTTGAGAGGACAGCAGA
GGGCTGTATCACACAAGACATTTGGCATTAGCCTGGAAGAGGTCCTGGTGAACGAGTTTACCCGCCGCAA
GCATCTTGAACTGACAGCCACGATGCAGGTTGAAGAAGCCACCGGTCAGGCTGCGGGCCGTCGTCGGGGA
AACGTGGTGCGAAGGGTGTTTGGCCGCATCCGGCGCTTTTTCAGTCGCAGGCGGAATGAGCCCACCTTGC
CCCGGGAGTTCACTCGCCGTGGGCGTCGAGGTGCAGTGTCTGTGGATAGTCTGGCTGAGCTGGAAGACGG
AGCCCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCC
AAAAGGAAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTGCTGCCAATTCA
TTGAAAAACATGGCTTAAGCGCAGTGGGGATTTTTACCCTTGAATACTCCGTGCAGCGAGTGCGTCAGCT
CCGTGAAGAATTTGATCAAGGTCTGGATGTAGTGCTGGATGACAATCAGAATGTGCATGATGTGGCTGCA
CTCCTCAAGGAGTTTTTCCGTGACATGAAGGATTCTCTGCTGCCAGATGATCTGTACATGTCATTCCTCC
TGACAGCAACTTTAAAGCCCCAGGATCAGCTTTCTGCCCTGCAGTTGCTGGTCTACCTGATGCCACCCTG
CCACAGTGATACCCTGGAGCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGGACTCAATT
GGCATTGATGGACAGTTGGTCCCAGGCAACCGTATGACTTCCACTAACTTGGCCTTGGTGTTTGGATCTG
CTCTCCTGAAAAAAGGAAAGTTTGGCAAGAGAGAGTCCAGGAAAACAAAGCTGGGGATTGATCACTATGT
TGCTTCTGTCAATGTGGTCCGTGCCATGATTGATAACTGGGATGTCCTCTTCCAGGTGCCTCCCCATATT
CAGAGGCAGGTTGCTAAGCGCGTGTGGAAGTCCAGCCCGGAAGCACTTGATTTTATCAGACGCAGGAACT
TGAGGAAGATCCAGAGTGCACGCATAAAGATGGAAGAGGATGCACTACTTTCTGATCCAGTGGAAACCTC
TGCTGAAGCCCGGGCTGCTGTCCTTGCTCAAAGCAAGCCTTCTGATGAAGGTTCCTCTGAGGAGCCAGCT
GTGCCTTCCGGCACTGCCCGTTCCCATGACGATGAGGAAGGAGCGGGTAACCCTCCCATTCCGGAGCAAG
ACCGCCCATTGCTCCGTGTGCCCCGGGAGAAGGAGGCCAAAACTGGCGTCAGCTACTTCTTTCCTTAG

Translation (535 aa):
MAWILDCLFASAFEPRPRRVSVLGGAPGHNPDRRTKMVSIHSLSELERLKLQETAYHELVARHFLSEFKP
DRALPIDRPNTLDKWFLILRGQQRAVSHKTFGISLEEVLVNEFTRRKHLELTATMQVEEATGQAAGRRRG
NVVRRVFGRIRRFFSRRRNEPTLPREFTRRGRRGAVSVDSLAELEDGALLLQTLQLSKISFPIGQRLLGS
KRKMSLNPIAKQIPQVVEACCQFIEKHGLSAVGIFTLEYSVQRVRQLREEFDQGLDVVLDDNQNVHDVAA
LLKEFFRDMKDSLLPDDLYMSFLLTATLKPQDQLSALQLLVYLMPPCHSDTLERLLKALHKITENCEDSI
GIDGQLVPGNRMTSTNLALVFGSALLKKGKFGKRESRKTKLGIDHYVASVNVVRAMIDNWDVLFQVPPHI
QRQVAKRVWKSSPEALDFIRRRNLRKIQSARIKMEEDALLSDPVETSAEARAAVLAQSKPSDEGSSEEPA
VPSGTARSHDDEEGAGNPPIPEQDRPLLRVPREKEAKTGVSYFFP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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