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Report for CCDS65695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65695.1 Public Homo sapiens 1 LY9 24 110 108 CCDS HistoryNCBI Gene:4063Re-query CCDS DB by CCDS ID:65695.1Re-query CCDS DB by GeneID:4063See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 65695.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368037.9 ENSP00000357016.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368037.9Link to Ensembl Protein Viewer:ENSP00000357016.5Re-query CCDS DB by Nucleotide ID:ENST00000368037Re-query CCDS DB by Protein ID:ENSP00000357016
Original member Current member NCBI NM_001261456.2 NP_001248385.1 Accepted alive Link to Nucleotide Sequence:NM_001261456.2Link to Protein Sequence:NP_001248385.1Re-query CCDS DB by Nucleotide ID:NM_001261456Re-query CCDS DB by Protein ID:NP_001248385Link to BLAST:NP_001248385.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001248385.1 641 Q9HBG7-2 641 100% 0 0

Chromosomal Locations for CCDS 65695.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 160796188 160796311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 160799753 160800082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 160813636 160813911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 160814420 160814761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 160816594 160816863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 160818218 160818319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 160819321 160819374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 160823507 160823796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 160824181 160824249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 160827748 160827816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1926 nt):
ATGGTGGCACCAAAGAGTCACACAGATGACTGGGCTCCTGGGCCTTTCTCCAGTAAGCCACAGAGGAGTC
AGCTGCAAATATTCTCTTCTGTTCTACAGACCTCTCTCCTCTTCCTGCTCATGGGACTAAGAGCCTCTGG
AAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCTAGGGGGTTCCGTGACTCTCCCCCTAAACATCTCA
GTAGACACAGAGATTGAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAG
AAAATGTAACCATTATGGTCAAAAGCTACCTGGGCCGACTAGACATCACCAAGTGGAGTTACTCCCTGTG
CATCAGCAATCTGACTCTGAATGATGCAGGATCCTACAAAGCCCAGATAAACCAAAGGAATTTTGAAGTC
ACCACTGAGGAGGAATTCACCCTGTTCGTCTATGAGCAGCTGCAGGAGCCCCAAGTCACCATGAAGTCTG
TGAAGGTGTCTGAGAACTTCTCCTGTAACATCACTCTAATGTGCTCCGTGAAGGGGGCAGAGAAAAGTGT
TCTGTACAGCTGGACCCCAAGGGAACCCCATGCTTCTGAGTCCAATGGAGGCTCCATTCTTACCGTCTCC
CGAACACCATGTGACCCAGACCTGCCATACATCTGCACAGCCCAGAACCCCGTCAGCCAGAGAAGCTCCC
TCCCTGTCCATGTTGGGCAGTTCTGTACAGATCCAGGAGCCTCCAGAGGAGGAACAACGGGGGAGACTGT
GGTAGGGGTCCTGGGAGAGCCAGTCACCCTGCCACTTGCACTCCCAGCCTGCCGGGACACAGAGAAGGTT
GTCTGGTTGTTTAACACATCCATCATTAGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTCATTA
AATCCAGGGATCCTTACAAGAACAGGGTGTGGGTCTCCAGCCAGGACTGCTCCCTGAAGATCAGCCAGCT
GAAGATAGAGGACGCCGGCCCCTACCATGCCTACGTGTGCTCAGAGGCCTCCAGCGTCACCAGCATGACA
CATGTCACCCTGCTCATCTACCGCAGGCTGAGGAAGCCCAAAATCACGTGGAGCCTCAGGCACAGTGAGG
ATGGCATCTGCAGGATCAGCCTGACCTGCTCCGTGGAGGACGGGGGAAACACTGTCATGTACACATGGAC
CCCGCTGCAGAAGGAAGCTGTTGTGTCCCAAGGGGAATCACACCTCAATGTCTCATGGAGAAGCAGTGAA
AATCACCCCAACCTCACATGCACAGCCAGCAACCCTGTCAGCAGGAGTTCCCACCAGTTTCTTTCTGAGA
ACATCTGTTCAGGACCTGAGAGAAACACAAAGCTTTGGATTGGGTTGTTCCTGATGGTTTGCCTTCTGTG
CGTTGGGATCTTCAGCTGGTGCATTTGGAAGCGAAAAGGACGGTGTTCAGTCCCAGCCTTCTGTTCCAGC
CAAGCTGAGGCCCCAGCGGATACACCAGGATATGAGAAGCTGGACACTCCCCTCAGGCCTGCCAGGCAAC
AGCCTACACCCACCTCAGACAGCAGCTCTGACAGCAACCTCACAACTGAGGAGGATGAGGACAGGCCTGA
GGTGCACAAGCCCATCAGTGGAAGATATGAGGTATTTGACCAGGTCACTCAGGAGGGCGCTGGACATGAC
CCAGCCCCTGAGGGCCAAGCAGACTATGATCCCGTCACTCCATATGTCACGGAAGTTGAGTCTGTGGTTG
GAGAGAACACCATGTATGCACAAGTGTTCAACTTACAGGGAAAGACCCCAGTTTCTCAGAAGGAAGAGAG
CTCAGCCACAATCTACTGCTCCATACGGAAACCTCAGGTGGTGCCACCACCACAACAGAATGATCTTGAG
ATTCCTGAAAGTCCTACCTATGAAAATTTCACCTGA

Translation (641 aa):
MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILGGSVTLPLNIS
VDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEV
TTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVS
RTPCDPDLPYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKV
VWLFNTSIISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMT
HVTLLIYRRLRKPKITWSLRHSEDGICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSE
NHPNLTCTASNPVSRSSHQFLSENICSGPERNTKLWIGLFLMVCLLCVGIFSWCIWKRKGRCSVPAFCSS
QAEAPADTPGYEKLDTPLRPARQQPTPTSDSSSDSNLTTEEDEDRPEVHKPISGRYEVFDQVTQEGAGHD
PAPEGQADYDPVTPYVTEVESVVGENTMYAQVFNLQGKTPVSQKEESSATIYCSIRKPQVVPPPQQNDLE
IPESPTYENFT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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