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Report for CCDS6620.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6620.1 Public Homo sapiens 9 ANKRD20A1 24 110 108 CCDS HistoryNCBI Gene:84210Re-query CCDS DB by CCDS ID:6620.1Re-query CCDS DB by GeneID:84210See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6620.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000562196.6 ENSP00000477695.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000562196.6Link to Ensembl Protein Viewer:ENSP00000477695.1Re-query CCDS DB by Nucleotide ID:ENST00000562196Re-query CCDS DB by Protein ID:ENSP00000477695
Original member Current member NCBI NM_032250.5 NP_115626.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032250.5Link to Protein Sequence:NP_115626.2Re-query CCDS DB by Nucleotide ID:NM_032250Re-query CCDS DB by Protein ID:NP_115626Link to BLAST:NP_115626.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115626.2 823 Q5TYW2 823 100% 0 0

Chromosomal Locations for CCDS 6620.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 67859427 67859629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67862941 67863055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67863218 67863391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67867277 67867383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67868429 67868566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67871157 67871212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67877760 67877790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67880476 67880545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67884486 67884570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67887276 67887304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67887396 67887468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67893436 67893506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67897559 67897722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67899147 67899327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 67900493 67901467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2472 nt):
ATGAAGTTATTCGGCTTCGGGAGCCGCAGGGGCCAGACGGCCCAGGGCTCCATAGACCACGTCTACACGG
GTTCCGGATACCGAATCCGGGACTCCGAACTGCAGAAGATCCACAGGGCAGCTGTCAAAGGCGACGCCGC
GGAGGTGGAGCGCTGCCTGGCGCGCAGGAGCGGAGACCTGGACGCCCTGGACAAGCAGCACAGAACTGCT
CTACACTTGGCCTGTACCAGTGGCCATGTGCAAGTGGTCACTCTCCTGGTTAACAGAAAATGCCAGATTG
ATGTCTGTGACAAAGAAAACAGAACGCCTTTGATACAGGCTGTCCATTGCCAGGAAGAGGCTTGTGCCGT
TATTCTGCTGGAACATGGCGCCAATCCAAACCTTAAGGATATCTACGGCAACACTGCTCTCCATTATGCC
GTGTATAGTGAGAGCACCTCACTGGCAGAAAAACTGCTTTCCCATGGTGCACATATTGAAGCACTGGACA
AGGACAATAATACCCCACTTTTATTTGCTATAATTTGCAAGAAAGAGAAAATGGTGGAATTTTTATTGAA
AAAGAAAGCAAGTTCACATGCCGTTGATAGGCTGAGACGGTCAGCTCTCATGCTTGCTGTATACTATGAC
TCACCAGGTATTGTCAATATCCTTCTTAAGCAAAATATTGATGTCTTCGCTCAAGACATGTGTGGACGAG
ATGCAGAAGATTATGCTATTTCTCATCATTTGACAAAAATTCAACAACAAATTTTGGAACATAAAAAGAA
GATACTTAAAAAGGAGAAATCAGATGTTGGAAGTTCTGATGAATCTGCAGTCAGCATTTTCCATGAACTG
CGTGTGGATTCATTGCCTGCATCGGATGACAAAGACTTGAATGTTGCTACTAAGCAGTGTGTCCCCGAGA
AAGTGTCAGAGCCTTTACCTGGATCTTCGCATGAAAAAGGAAACAGAATAGTCAATGGACAAGGAGAAGG
GCCTCCTGCAAAACATCCTTCCTTGAAGCCTAGCACTGAAGTGGAAGATCCTGCTGTGAAAGGAGCAGTA
CAAAGAAAGAATGTACAGACATTGAGAGCAGAACAAGCCTTACCAGTGGCTTCAGAGGAAGAGCAAGAAA
GGCATGAAAGAAGTGAAAAGAAGCAACCACAGGTCAAAGAAGGAAATAATACAAACAAAAGTGAAAAAAT
ACAACTTTCAGAAAATATATGTGATAGTACATCTTCTGCTGCTGCTGGCAGATTAACCCAACAAAGAAAG
ATTGGGAAAACGTATCCTCAGCAATTTCCCAAGAAGCTGAAGGAAGAGCATGATAGATGCACCTTAAAAC
AAGAAAATGAAGAAAAAACAAATGTTAATATGCTGTACAAAAAAAATAGAGAAGAATTAGAAAGGAAAGA
GAAACAATATAAGAAAGAAGTTGAAGCAAAACAACTTGAACCAACTGTTCAGTCACTAGAGATGAAATCA
AAGACTGCAAGAAATACTCCAAATTGGGATTTTCATAATCATGAAGAAATGAAAGGTCTGATGGATGAAA
ATTGCATTTTGAAGGCAGATATTGCTATACTCAGACAGGAAATATGTACAATGAAAAATGACAACTTGGA
AAAAGAAAATAAATATCTTAAGGACATTAAAATTGTTAAAGAAACAAATGCTGCCCTTGAAAAGTATATA
AAACTCAATGAGGAAATGATAACAGAAACAGCATTCCGGTATCAACAAGAGCTTAATGATCTCAAGGCTG
AGAATACAAGGCTCAATGCCGAACTGTTGAAGGAAAAAGAAAGCAAGAAAAGACTGGAAGCTGACATTGA
ATCTTATCAGTCTAGACTGGCTGCTGCTATAAGCAAACACAGTGAAAGTGTGAAAACAGAAAGAAACCTA
AAACTTGCTTTAGAGAGAACACGAGATGTTTCTGTACAAGTAGAAATGAGTTCTGCTATTTCCAAAGTAA
AAGCTGAGAATGAGTTTCTTACTGAACAACTTTCTGAAACACAAATTAAATTCAATGCCTTAAAAGATAA
GTTCCGTAAGACAAGAGATAGTCTCAGAAAAAAGTCATTGGCTTTAGAAACTGTACAAAACGACCTAAGC
CAAACACAGCAGCAAACACAGGAAATGAAAGAGATGTATCAAAATGCAGAAGCTAAAGTGAATAATTCCA
CTGGAAAGTGGAACTGTGTAGAAGAGAGGATATGTCACCTCCAACGTGAAAATGCGTGGCTTGTACAGCA
ACTAGATGACGTTCATCAGAAAGAGGATCATAAAGAGATAGTAACTAATATCCAAAGAGGCTTTATTGAG
AGTGGAAAGAAAGACCTCGTGCTAGAAGAGAAAAGTAAGAAGCTAATGAATGAATGTGATCATTTAAAAG
AAAGTCTCTTTCAGTATGAGAGAGAGAAAACAGAAGGAGTAGTAAGTATCAAGGAAGATAAATATTTTCA
AACTTCTAGAAAGACAATTTAA

Translation (823 aa):
MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDLDALDKQHRTA
LHLACTSGHVQVVTLLVNRKCQIDVCDKENRTPLIQAVHCQEEACAVILLEHGANPNLKDIYGNTALHYA
VYSESTSLAEKLLSHGAHIEALDKDNNTPLLFAIICKKEKMVEFLLKKKASSHAVDRLRRSALMLAVYYD
SPGIVNILLKQNIDVFAQDMCGRDAEDYAISHHLTKIQQQILEHKKKILKKEKSDVGSSDESAVSIFHEL
RVDSLPASDDKDLNVATKQCVPEKVSEPLPGSSHEKGNRIVNGQGEGPPAKHPSLKPSTEVEDPAVKGAV
QRKNVQTLRAEQALPVASEEEQERHERSEKKQPQVKEGNNTNKSEKIQLSENICDSTSSAAAGRLTQQRK
IGKTYPQQFPKKLKEEHDRCTLKQENEEKTNVNMLYKKNREELERKEKQYKKEVEAKQLEPTVQSLEMKS
KTARNTPNWDFHNHEEMKGLMDENCILKADIAILRQEICTMKNDNLEKENKYLKDIKIVKETNAALEKYI
KLNEEMITETAFRYQQELNDLKAENTRLNAELLKEKESKKRLEADIESYQSRLAAAISKHSESVKTERNL
KLALERTRDVSVQVEMSSAISKVKAENEFLTEQLSETQIKFNALKDKFRKTRDSLRKKSLALETVQNDLS
QTQQQTQEMKEMYQNAEAKVNNSTGKWNCVEERICHLQRENAWLVQQLDDVHQKEDHKEIVTNIQRGFIE
SGKKDLVLEEKSKKLMNECDHLKESLFQYEREKTEGVVSIKEDKYFQTSRKTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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