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Report for CCDS66241.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66241.1 Public Homo sapiens 11 MPZL3 24 110 108 CCDS HistoryNCBI Gene:196264Re-query CCDS DB by CCDS ID:66241.1Re-query CCDS DB by GeneID:196264See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66241.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000527472.1 ENSP00000432106.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527472.1Link to Ensembl Protein Viewer:ENSP00000432106.1Re-query CCDS DB by Nucleotide ID:ENST00000527472Re-query CCDS DB by Protein ID:ENSP00000432106
Original member Current member NCBI NM_001286152.2 NP_001273081.1 Accepted alive Link to Nucleotide Sequence:NM_001286152.2Link to Protein Sequence:NP_001273081.1Re-query CCDS DB by Nucleotide ID:NM_001286152Re-query CCDS DB by Protein ID:NP_001273081Link to BLAST:NP_001273081.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273081.1 223 Q6UWV2-2 223 100% 0 0

Chromosomal Locations for CCDS 66241.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 118229894 118229920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118233460 118233523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118235424 118235589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118237050 118237260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118240211 118240341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118252222 118252294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGCAGCAGAGAGGAGCAGCTGGAAGCCGTGGCTGCGCTCTCTTCCCTCTGCTGGGCGTCCTGTTCTTCC
AGGATGCCCATGTCCGAGGTTATGTTGGAGAAAAGATCAAGTTGAAATGCACTTTCAAGTCAACTTCAGA
TGTCACTGACAAACTTACTATAGACTGGACATATCGCCCTCCCAGCAGCAGCCACACAGTATCAATATTT
CATTATCAGTCTTTCCAGTACCCAACCACAGCAGGCACATTTCGGGATCGGATTTCCTGGGTTGGAAATG
TATACAAAGGGGATGCATCTATAAGTATAAGCAACCCTACCATAAAGGACAATGGGACATTCAGCTGTGC
TGTGAAGAATCCCCCAGATGTGCATCATAATATTCCCATGACAGAGCTAACAGTCACAGAAAGGGGTTTT
GGCACCATGCTTTCCTCTGTGGCCCTTCTTTCCATCCTTGTCTTTGTGCCCTCAGCCGTGGTGGTTGCTC
TGCTGCTGGTGAGAATGGGGAGGAAGGCTGCTGGGCTGAAGAAGAGGAGCAGGTCTGGCTATAAGAAGTC
ATCTATTGAGGTTTCCGATGACACTGATCAGGAGGAGGAAGAGGCGTGTATGGCGAGGCTTTGTGTCCGT
TGCGCTGAGTGCCTGGATTCAGACTATGAAGAGACATATTGA

Translation (223 aa):
MQQRGAAGSRGCALFPLLGVLFFQDAHVRGYVGEKIKLKCTFKSTSDVTDKLTIDWTYRPPSSSHTVSIF
HYQSFQYPTTAGTFRDRISWVGNVYKGDASISISNPTIKDNGTFSCAVKNPPDVHHNIPMTELTVTERGF
GTMLSSVALLSILVFVPSAVVVALLLVRMGRKAAGLKKRSRSGYKKSSIEVSDDTDQEEEEACMARLCVR
CAECLDSDYEETY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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