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Report for CCDS6775.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6775.1 Public Homo sapiens 9 CTNNAL1 24 110 108 CCDS HistoryNCBI Gene:8727Re-query CCDS DB by CCDS ID:6775.1Re-query CCDS DB by GeneID:8727See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6775.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325551.9 ENSP00000320434.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325551.9Link to Ensembl Protein Viewer:ENSP00000320434.4Re-query CCDS DB by Nucleotide ID:ENST00000325551Re-query CCDS DB by Protein ID:ENSP00000320434
Original member Current member NCBI NM_003798.4 NP_003789.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003798.4Link to Protein Sequence:NP_003789.1Re-query CCDS DB by Nucleotide ID:NM_003798Re-query CCDS DB by Protein ID:NP_003789Link to BLAST:NP_003789.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003789.1 734 Q9UBT7-1 734 100% 0 0

Chromosomal Locations for CCDS 6775.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 108942769 108942834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108942961 108943044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108943703 108943816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108943962 108944018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108948186 108948234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108952209 108952363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108952444 108952494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108955790 108955827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108965378 108965528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108970402 108970494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108972675 108972833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108976962 108977048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108979281 108979481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108983145 108983315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108984347 108984436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108990726 108990845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108992632 108992819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108999067 108999256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109013302 109013442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2205 nt):
ATGGCCGCCTCTCCCGGACCCGCCGGCGTTGGCGGCGCCGGAGCAGTCTACGGCTCCGGCTCTTCGGGCT
TCGCCCTCGACTCGGGACTGGAGATCAAAACTCGCTCGGTGGAGCAGACGCTACTCCCGCTGGTTTCTCA
GATCACCACGCTTATTAATCATAAAGATAATACCAAAAAGTCTGATAAAACTCTGCAAGCAATTCAGCGT
GTAGGACAAGCTGTCAACTTGGCAGTTGGAAGATTTGTTAAAGTAGGAGAAGCTATAGCCAATGAAAACT
GGGATTTGAAAGAAGAAATAAATATTGCTTGTATTGAAGCTAAACAAGCAGGAGAAACAATTGCAGCACT
TACAGACATAACCAACTTGAACCATCTGGAATCTGATGGGCAGATCACAATTTTTACAGACAAAACAGGA
GTGATAAAGGCTGCAAGATTACTTCTTTCTTCAGTGACAAAAGTGTTGTTGCTGGCAGACCGAGTAGTCA
TTAAACAGATAATAACATCAAGAAATAAGGTTCTCGCAACTATGGAAAGACTAGAGAAAGTGAATAGCTT
TCAAGAGTTTGTCCAAATATTCAGTCAATTTGGAAATGAAATGGTGGAGTTTGCACATCTGAGTGGAGAT
AGACAAAATGATTTGAAAGATGAAAAGAAAAAGGCAAAAATGGCAGCAGCTAGGGCAGTTCTTGAAAAGT
GTACAATGATGCTTCTCACAGCTTCAAAGACATGTCTGAGGCATCCTAACTGCGAATCAGCCCATAAAAA
CAAAGAAGGAGTATTTGACCGTATGAAAGTGGCATTGGATAAGGTCATTGAAATTGTGACTGACTGTAAA
CCGAATGGAGAGACTGACATTTCATCTATCAGTATTTTTACTGGAATTAAGGAATTCAAGATGAATATTG
AAGCTCTTCGGGAGAATCTTTATTTTCAGTCCAAAGAGAACCTTTCTGTGACATTGGAAGTCATCTTGGA
GCGTATGGAGGACTTTACTGATTCTGCCTACACCAGCCATGAGCACAGAGAACGCATCTTGGAACTGTCA
ACTCAGGCGAGAATGGAACTGCAGCAGTTAATTTCTGTGTGGATTCAAGCTCAAAGCAAGAAAACAAAAA
GCATCGCTGAAGAACTGGAACTCAGTATTTTGAAAATCAGTCACAGTCTTAATGAACTTAAGAAAGAACT
TCATAGTACAGCGACACAGCTGGCAGCAGATCTATTAAAATACCATGCTGATCATGTGGTTCTAAAAGCA
TTAAAACTTACTGGAGTAGAAGGAAATTTAGAAGCTTTGGCTGAATATGCCTGTAAACTCTCTGAACAGA
AAGAGCAGCTTGTTGAGACCTGTCGATTGTTACGACACATATCTGGGACAGAACCTCTGGAAATAACCTG
TATACATGCAGAGGAGACATTTCAGGTGACTGGCCAACAGATAATTTCTGCTGCTGAAACATTGACATTG
CATCCATCTAGTAAAATTGCTAAAGAAAACCTAGATGTATTTTGTGAAGCTTGGGAATCCCAAATTAGTG
ACATGTCAACACTGCTGAGAGAAATCAATGACGTGTTTGAAGGAAGACGAGGAGAGAAGTATGGCTACCT
TTCACTTCCAAAGCCAATGAAGAATAATGCAAACCTGAAATCATTAAAGCCAGACAAGCCTGACTCTGAG
GAGCAAGCCAAGATAGCAAAGCTTGGACTTAAGCTGGGTTTGCTCACCTCTGACGCTGACTGCGAAATTG
AGAAGTGGGAAGATCAGGAGAATGAGATTGTTCAATATGGACGGAACATGTCCAGTATGGCCTATTCTCT
GTATTTATTTACTAGAGGAGAGGGGCCACTGAAAACTTCCCAGGATTTAATTCATCAACTAGAGGTTTTT
GCTGCAGAGGGTTTAAAGCTTACTTCCAGTGTTCAAGCTTTTTCAAAACAGCTGAAAGACGATGACAAGC
TTATGCTTCTCCTGGAAATAAACAAGCTAATTCCTCTATGCCACCAGCTCCAGACAGTAACTAAGACTTC
TTTGCAGAATAAAGTATTTCTAAAGGTTGACAAGTGTATTACGAAGACAAGATCCATGATGGCTCTCTTA
GTCCAACTTCTTTCACTTTGTTATAAACTGCTGAAGAAGCTTCAGATGGAAAATAACGGATGGGTCTCAG
TTACAAATAAGGACACTATGGATAGTAAAACTTGA

Translation (734 aa):
MAASPGPAGVGGAGAVYGSGSSGFALDSGLEIKTRSVEQTLLPLVSQITTLINHKDNTKKSDKTLQAIQR
VGQAVNLAVGRFVKVGEAIANENWDLKEEINIACIEAKQAGETIAALTDITNLNHLESDGQITIFTDKTG
VIKAARLLLSSVTKVLLLADRVVIKQIITSRNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLSGD
RQNDLKDEKKKAKMAAARAVLEKCTMMLLTASKTCLRHPNCESAHKNKEGVFDRMKVALDKVIEIVTDCK
PNGETDISSISIFTGIKEFKMNIEALRENLYFQSKENLSVTLEVILERMEDFTDSAYTSHEHRERILELS
TQARMELQQLISVWIQAQSKKTKSIAEELELSILKISHSLNELKKELHSTATQLAADLLKYHADHVVLKA
LKLTGVEGNLEALAEYACKLSEQKEQLVETCRLLRHISGTEPLEITCIHAEETFQVTGQQIISAAETLTL
HPSSKIAKENLDVFCEAWESQISDMSTLLREINDVFEGRRGEKYGYLSLPKPMKNNANLKSLKPDKPDSE
EQAKIAKLGLKLGLLTSDADCEIEKWEDQENEIVQYGRNMSSMAYSLYLFTRGEGPLKTSQDLIHQLEVF
AAEGLKLTSSVQAFSKQLKDDDKLMLLLEINKLIPLCHQLQTVTKTSLQNKVFLKVDKCITKTRSMMALL
VQLLSLCYKLLKKLQMENNGWVSVTNKDTMDSKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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