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Report for CCDS6787.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6787.1 Public Homo sapiens 9 ZFP37 24 110 108 CCDS HistoryNCBI Gene:7539Re-query CCDS DB by CCDS ID:6787.1Re-query CCDS DB by GeneID:7539See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6787.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374227.8 ENSP00000363344.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374227.8Link to Ensembl Protein Viewer:ENSP00000363344.3Re-query CCDS DB by Nucleotide ID:ENST00000374227Re-query CCDS DB by Protein ID:ENSP00000363344
Original member Current member NCBI NM_003408.3 NP_003399.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003408.3Link to Protein Sequence:NP_003399.1Re-query CCDS DB by Nucleotide ID:NM_003408Re-query CCDS DB by Protein ID:NP_003399Link to BLAST:NP_003399.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003399.1 630 Q9Y6Q3-1 630 100% 0 0

Chromosomal Locations for CCDS 6787.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 113042725 113044268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113049362 113049496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113049791 113049872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113056557 113056688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1893 nt):
ATGTCGGTCTCCAGCGGCGTCCAGATTCTGACAAAGCCAGAGACCGTGGACCGGAGGAGAAGTGCGGAAA
CGACCAAAGAGGCCGGGCGACCACTGGAGATGGCTGTGTCCGAGCCCGAGGCCAGCGCCGCGGAATGGAA
GCAACTGGATCCTGCTCAGAGCAACCTGTATAATGATGTGATGCTGGAGAACTACTGCAACCAAGCCTCA
ATGGGGTGTCAAGCTCCCAAACCAGACATGATCTCCAAGTTGGAAAAAGGAGAAGCACCATGGTTGGGGA
AGGGGAAAAGACCCAGTCAAGGTTGTCCAAGTAAAATAGCAAGACCCAAGCAAAAAGAAACTGATGGAAA
AGTCCAGAAAGATGATGACCAGCTTGAAAATATCCAGAAATCTCAAAACAAACTCCTCAGGGAAGTTGCA
GTCAAGAAGAAAACTCAAGCTAAGAAGAATGGCAGTGACTGTGGTTCACTGGGGAAAAAAAATAATTTGC
ATAAAAAACATGTTCCTTCAAAGAAAAGGCTTCTTAAATTTGAGTCATGTGGAAAAATTTTGAAACAGAA
TTTAGATTTACCTGATCACTCAAGAAACTGTGTAAAAAGGAAATCTGATGCAGCTAAAGAACACAAGAAG
TCATTCAACCATAGCTTATCTGATACAAGGAAAGGCAAAAAGCAAACTGGAAAGAAACATGAGAAATTAT
CCAGCCATAGCTCATCTGATAAGTGTAACAAAACTGGCAAAAAACATGACAAATTATGCTGTCATAGTTC
ATCCCATATTAAACAGGACAAAATTCAAACTGGAGAGAAACATGAGAAATCACCCAGCCTTAGCTCATCT
ACTAAGCATGAAAAACCTCAAGCTTGTGTGAAACCCTATGAATGTAATCAATGTGGAAAGGTTCTCAGCC
ATAAACAAGGACTCATTGACCATCAGAGAGTTCATACTGGGGAGAAACCATATGAATGTAATGAATGTGG
GATAGCCTTTAGCCAAAAGTCACACCTTGTTGTACATCAGAGAACTCACACCGGAGAAAAACCATATGAA
TGTATTCAGTGTGGCAAAGCCCATGGTCATAAACATGCACTCACTGACCATCTAAGAATTCATACTGGAG
AAAAGCCCTATGAATGTGCTGAATGTGGGAAAACCTTCAGACACAGCTCAAACCTTATTCAACATGTGAG
ATCTCACACAGGTGAGAAGCCATATGAATGTAAGGAATGTGGGAAGTCTTTTAGGTATAACTCATCTCTT
ACCGAACATGTGAGAACACATACAGGTGAAATACCATATGAATGCAATGAATGTGGAAAAGCCTTTAAGT
ATAGCTCATCCCTTACTAAACACATGAGAATTCATACAGGTGAGAAACCCTTTGAATGTAATGAATGTGG
GAAAGCTTTCAGCAAGAAGTCACACCTCATTATACATCAAAGAACTCATACTAAGGAGAAACCTTATAAA
TGTAATGAGTGTGGAAAAGCCTTTGGACATAGCTCATCTCTTACTTACCATATGAGAACTCATACAGGTG
AAAGTCCCTTTGAATGTAATCAATGTGGGAAAGGCTTTAAACAAATTGAAGGCCTTACTCAACATCAGAG
AGTTCATACTGGAGAGAAACCGTATGAGTGTAATGAATGTGGGAAAGCCTTTAGCCAAAAGTCTCACCTC
ATTGTACATCAGAGAACTCATACTGGGGAGAAACCTTATGAATGTAACGAATGTGAAAAAGCCTTTAATG
CAAAATCACAGCTTGTTATACATCAGCGATCCCACACTGGAGAAAAACCCTATGAATGTAATGAATGTGG
GAAAACTTTCAAACAAAATGCATCCCTAACCAAACATGTGAAAACTCATTCAGAAGATAAATCTCATGAG
TGA

Translation (630 aa):
MSVSSGVQILTKPETVDRRRSAETTKEAGRPLEMAVSEPEASAAEWKQLDPAQSNLYNDVMLENYCNQAS
MGCQAPKPDMISKLEKGEAPWLGKGKRPSQGCPSKIARPKQKETDGKVQKDDDQLENIQKSQNKLLREVA
VKKKTQAKKNGSDCGSLGKKNNLHKKHVPSKKRLLKFESCGKILKQNLDLPDHSRNCVKRKSDAAKEHKK
SFNHSLSDTRKGKKQTGKKHEKLSSHSSSDKCNKTGKKHDKLCCHSSSHIKQDKIQTGEKHEKSPSLSSS
TKHEKPQACVKPYECNQCGKVLSHKQGLIDHQRVHTGEKPYECNECGIAFSQKSHLVVHQRTHTGEKPYE
CIQCGKAHGHKHALTDHLRIHTGEKPYECAECGKTFRHSSNLIQHVRSHTGEKPYECKECGKSFRYNSSL
TEHVRTHTGEIPYECNECGKAFKYSSSLTKHMRIHTGEKPFECNECGKAFSKKSHLIIHQRTHTKEKPYK
CNECGKAFGHSSSLTYHMRTHTGESPFECNQCGKGFKQIEGLTQHQRVHTGEKPYECNECGKAFSQKSHL
IVHQRTHTGEKPYECNECEKAFNAKSQLVIHQRSHTGEKPYECNECGKTFKQNASLTKHVKTHSEDKSHE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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