NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS6913.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6913.1 Public Homo sapiens 9 SPOUT1 24 110 108 CCDS HistoryNCBI Gene:51490Re-query CCDS DB by CCDS ID:6913.1Re-query CCDS DB by GeneID:51490See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6913.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361256.10 ENSP00000354812.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361256.10Link to Ensembl Protein Viewer:ENSP00000354812.5Re-query CCDS DB by Nucleotide ID:ENST00000361256Re-query CCDS DB by Protein ID:ENSP00000354812
Original member Current member NCBI NM_016390.4 NP_057474.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016390.4Link to Protein Sequence:NP_057474.2Re-query CCDS DB by Nucleotide ID:NM_016390Re-query CCDS DB by Protein ID:NP_057474Link to BLAST:NP_057474.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057474.2 376 Q5T280 376 100% 0 0

Chromosomal Locations for CCDS 6913.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128822765 128822833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128823747 128823894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128824072 128824174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128824771 128824869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128824977 128825049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128826022 128826152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128826384 128826433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128826540 128826629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128827032 128827191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128828735 128828860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128829110 128829155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128829745 128829780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGGCGGAGCGCGGCAGGAAGCGGCCGTGCGGCCCGGGTGAACACGGCCAAAGGATTGAGTGGCGAAAAT
GGAAGCAACAGAAGAAAGAGGAGAAAAAAAAATGGAAGGATCTCAAGCTGATGAAAAAACTGGAGCGGCA
GCGGGCACAGGAGGAACAGGCAAAGCGCCTGGAAGAGGAGGAGGCAGCGGCAGAGAAGGAGGACCGCGGG
CGGCCCTACACACTGAGCGTAGCCCTGCCGGGCTCCATCCTGGACAATGCTCAGTCGCCGGAGCTTCGCA
CCTACTTGGCCGGTCAGATTGCCAGAGCCTGTGCCATCTTCTGTGTGGATGAGATCGTGGTGTTTGATGA
GGAGGGCCAGGATGCCAAGACTGTGGAGGGGGAATTCACAGGAGTTGGGAAGAAGGGGCAGGCGTGCGTA
CAGCTGGCCCGGATCCTGCAGTACCTGGAGTGTCCACAGTACCTGAGGAAGGCGTTCTTCCCCAAGCACC
AGGATCTACAGTTTGCAGGGCTCCTGAACCCCCTGGACAGCCCCCACCACATGCGTCAGGATGAGGAATC
CGAGTTCCGAGAGGGCATCGTGGTGGATCGGCCCACCCGGCCAGGCCACGGCTCCTTTGTCAACTGTGGC
ATGAAAAAGGAGGTGAAGATTGACAAGAACCTGGAGCCCGGGCTTCGGGTGACTGTGCGACTGAACCAGC
AGCAGCACCCAGACTGCAAGACCTACCATGGCAAAGTGGTATCATCGCAGGACCCTCGCACCAAAGCTGG
TCTCTACTGGGGCTACACCGTCCGACTGGCTTCCTGCCTCAGTGCTGTGTTTGCTGAGGCCCCCTTCCAA
GATGGGTATGACCTGACCATCGGGACGTCAGAGCGCGGCTCAGATGTGGCCTCTGCCCAGCTTCCCAACT
TCAGGCATGCTCTTGTGGTGTTCGGGGGCCTCCAGGGTCTGGAAGCTGGAGCGGATGCTGACCCCAACCT
GGAGGTGGCTGAACCCAGTGTCCTCTTTGACCTGTACGTCAATACCTGTCCTGGCCAGGGTAGCCGTACC
ATCCGCACGGAGGAAGCCATCCTCATCTCCCTGGCCGCCCTGCAGCCTGGCCTCATCCAGGCGGGTGCCC
GGCACACCTGA

Translation (376 aa):
MAERGRKRPCGPGEHGQRIEWRKWKQQKKEEKKKWKDLKLMKKLERQRAQEEQAKRLEEEEAAAEKEDRG
RPYTLSVALPGSILDNAQSPELRTYLAGQIARACAIFCVDEIVVFDEEGQDAKTVEGEFTGVGKKGQACV
QLARILQYLECPQYLRKAFFPKHQDLQFAGLLNPLDSPHHMRQDEESEFREGIVVDRPTRPGHGSFVNCG
MKKEVKIDKNLEPGLRVTVRLNQQQHPDCKTYHGKVVSSQDPRTKAGLYWGYTVRLASCLSAVFAEAPFQ
DGYDLTIGTSERGSDVASAQLPNFRHALVVFGGLQGLEAGADADPNLEVAEPSVLFDLYVNTCPGQGSRT
IRTEEAILISLAALQPGLIQAGARHT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH