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Report for CCDS6955.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6955.1 Public Homo sapiens 9 SPACA9 24 110 108 CCDS HistoryNCBI Gene:11092Re-query CCDS DB by CCDS ID:6955.1Re-query CCDS DB by GeneID:11092See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6955.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000350499.6 ENSP00000298546.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000350499.6Link to Ensembl Protein Viewer:ENSP00000298546.7Re-query CCDS DB by Nucleotide ID:ENST00000350499Re-query CCDS DB by Protein ID:ENSP00000298546
Original member Current member NCBI NM_018956.5 NP_061829.3 Accepted alive Link to Nucleotide Sequence:NM_018956.5Link to Protein Sequence:NP_061829.3Re-query CCDS DB by Nucleotide ID:NM_018956Re-query CCDS DB by Protein ID:NP_061829Link to BLAST:NP_061829.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061829.3 168 Q96E40-2 168 100% 0 0

Chromosomal Locations for CCDS 6955.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 132883948 132884091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132887369 132887571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132888290 132888437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132889957 132889968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGAATGAGGTGAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCA
CCTTCACCGCCGCTCTGGAGCACTGCAGGGAGAACGCCCACGACAAGATCCGGCCCATCTCCAGCATTGG
ACAGGTGCAGAGCTACATGGAACACTACTGCAACAGCTCCACAGACCGGCGGGTTCTGCTCATGTTCCTG
GACATCTGTTCAGAGCTGAATAAGCTCTGCCAGCACTTTGAGGCCGTGCACTCTGGCACCCCAGTCACCA
ACAACCTCCTGGAGAAATGCAAAACCCTCGTTAGCCAAAGCAACGACTTAAGCAGCCTCAGAGCAAAATA
CCCTCATGATGTGGTGAACCACCTCAGCTGTGACGAGGCCCGGAACCACTACGGCGGCGTGGTCAGCCTC
ATCCCCCTCATCCTAGACTTAATGAAAGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGC
AGCACGGGACGACTTAG

Translation (168 aa):
MNEVKESLRSIEQKYKLFQQQQLTFTAALEHCRENAHDKIRPISSIGQVQSYMEHYCNSSTDRRVLLMFL
DICSELNKLCQHFEAVHSGTPVTNNLLEKCKTLVSQSNDLSSLRAKYPHDVVNHLSCDEARNHYGGVVSL
IPLILDLMKEWIAHSEKLPRKVLQHGTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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